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Pull requests list

Annotate all existing WFs with edam topics and operations WIP
#639 opened Dec 17, 2024 by wm75 Loading…
1
website workflow list updates from hackathon enhancement New feature or request website
#638 opened Dec 16, 2024 by dannon • Draft
12 tasks
Updating workflows/proteomics/clinicalmp/clinicalmp-verification from 0.1 to 0.2
#636 opened Dec 16, 2024 by gxydevbot Loading…
Updating workflows/proteomics/clinicalmp/clinicalmp-discovery from 0.1 to 0.2
#635 opened Dec 16, 2024 by gxydevbot Loading…
1
VGP 4 - update tools and add Hi-C read trimming option (replace broken PR 507)
#633 opened Dec 13, 2024 by Delphine-L Loading…
2
Add workflow: genome annotation with Maker
#631 opened Dec 11, 2024 by rlibouba • Draft
3
Add 'metaQuantome Taxonomy' workflow
#630 opened Dec 10, 2024 by clsiguret Loading…
5 tasks done
1
Add 'metaQuantome function' workflow
#628 opened Dec 10, 2024 by clsiguret Loading…
5 tasks done
9
Add Metaproteomics GTN workflow
#626 opened Dec 10, 2024 by clsiguret Loading…
5 tasks done
21
Updating workflows/VGP-assembly-v2/Assembly-Hifi-only-VGP3 from 0.2.2 to 0.2.3
#624 opened Dec 9, 2024 by gxydevbot Loading…
3
add MIT licence - copied from tools-iuc
#613 opened Nov 21, 2024 by fubar2 Loading…
7
add pre-curation jbrowse generation workflow complementary to the PretextMap generation
#612 opened Nov 20, 2024 by Delphine-L • Draft
Build page preview on all PRs
#611 opened Nov 20, 2024 by mvdbeek Loading…
2
Split collections into 2
#593 opened Nov 8, 2024 by lldelisle Loading…
13
Add ecoregionalization workflow
#588 opened Nov 5, 2024 by PaulineSGN Loading…
7
Updating workflows/variant-calling/haploid-variant-calling-wgs-pe from 0.1 to 0.2
#587 opened Nov 4, 2024 by gxydevbot Loading…
3
feat: updated version of pretext workflow developed by Delphine that takes HiFi and HiC as input.
#584 opened Oct 28, 2024 by Smeds Loading…
37
Add new ChIP-Seq WF that handles replicates and controls
#581 opened Oct 24, 2024 by wm75 Loading…
20
add lncRNAs annotation workflow
#579 opened Oct 22, 2024 by rlibouba Loading…
Updating workflows/VGP-assembly-v2/Assembly-decontamination-VGP9 from 0.3 to 0.4
#572 opened Oct 14, 2024 by gxydevbot Loading…
5
[Draft] Addition of Treevalgal workflows
#559 opened Oct 10, 2024 by Delphine-L Loading…
Propose two VGP workflows generating customised browsers
#557 opened Oct 9, 2024 by fubar2 Loading…
10
Add a new scRNA workflow for standard analysis using Scanpy
#556 opened Oct 9, 2024 by pavanvidem Loading…
28
add_helixer_workflow
#555 opened Oct 8, 2024 by rlibouba Loading…
21
Fix test syntax issues.
#530 opened Sep 23, 2024 by jmchilton Loading…
25
ProTip! What’s not been updated in a month: updated:<2024-11-17.