prokka

Prokka

About: |

Whole genome annotation is the process of identifying features of interest in a set of genomic DNA sequences, and labelling them with useful information. Prokka is a software tool to annotate bacterial, archaeal and viral genomes quickly and produce standards-compliant output files.

Documentation : https://github.com/tseemann/prokka

Citation : https://pubmed.ncbi.nlm.nih.gov/24642063/

Directory tree:

prokka/
└── sample
    ├── sample.err
    ├── sample.faa
    ├── sample.ffn
    ├── sample.fna
    ├── sample.fsa
    ├── sample.gbk
    ├── sample.gff
    ├── sample.log
    ├── sample.sqn
    ├── sample.tbl
    ├── sample.tsv
    └── sample.txt

The *gff files are used for core genome alignment.