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Young edited this page Feb 23, 2024 · 2 revisions

HeatCluster

About: |

a Python tool for visualizing SNP (Single Nucleotide Polymorphism) matrices generated via SNP-dists as heatmaps

Documentation : https://github.com/DrB-S/heatcluster

Citation :

Directory tree:

heatcluster/
├── heatcluster.png
└── sorted_matrix.csv

Example files:

heatcluster.png

heatcluster

sorted_matrix.csv

,GCF_000788095.1_ASM78809v1_genomic,GCF_000758465.1_ASM75846v1_genomic,GCF_000742995.1_ASM74299v1_genomic,GCF_000978875.1_ASM97887v1_genomic,GCF_000834105.1_ASM83410v1_genomic,GCF_000972335.1_ASM97233v1_genomic
GCF_000788095.1_ASM78809v1_genomic,0,10K+,10K+,10K+,10K+,10K+
GCF_000758465.1_ASM75846v1_genomic,10K+,0,10K+,10K+,10K+,10K+
GCF_000742995.1_ASM74299v1_genomic,10K+,10K+,0,10K+,10K+,10K+
GCF_000978875.1_ASM97887v1_genomic,10K+,10K+,10K+,0,10K+,10K+
GCF_000834105.1_ASM83410v1_genomic,10K+,10K+,10K+,10K+,0,10K+
GCF_000972335.1_ASM97233v1_genomic,10K+,10K+,10K+,10K+,10K+,0
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