Code

Bm browse view#305

Code

Merged

Bianca-Morris merged 76 commits intomainsmaht-dac/smaht-portal:mainfrom bm-browse-viewsmaht-dac/smaht-portal:bm-browse-viewCopy head branch name to clipboardJan 23, 2025

+1,796-662

Commits

Commits on Dec 1, 2024

• Title styling layout tweaks

  Bianca-Morris

  committed
  812ff8d

  Copy full SHA for 812ff8d

• Pull out benchmarking ui into separate component

  Bianca-Morris

  committed
  0918f60

  Copy full SHA for 0918f60

• Rework benchmarking to use new component

  Bianca-Morris

  committed
  ceb3495

  Copy full SHA for ceb3495

• Add some basic layout components

  Bianca-Morris

  committed
  b3c6226

  Copy full SHA for b3c6226

Commits on Dec 2, 2024

• Icon fix + add above facet component

  Bianca-Morris

  committed
  fad0c49

  Copy full SHA for fad0c49

• Merge branch 'main' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  082410e

  Copy full SHA for 082410e

• Get selection boxes working

  Bianca-Morris

  committed
  44502c2

  Copy full SHA for 44502c2

Commits on Dec 5, 2024

• Start BrowseViewAboveTableComponent

  Bianca-Morris

  committed
  df42970

  Copy full SHA for df42970

Commits on Dec 12, 2024

• Style tweak for above-facets-table-row

  Bianca-Morris

  committed
  d7e98fd

  Copy full SHA for d7e98fd

• Fix column styling

  Bianca-Morris

  committed
  2e469d0

  Copy full SHA for 2e469d0

• Rework above table controls

  Bianca-Morris

  committed
  035d4e1

  Copy full SHA for 035d4e1

• include 'status' facet in peek-metadata resp

  Bianca-Morris

  committed
  34f3ed2

  Copy full SHA for 34f3ed2

• Replace static statistics with dynamic ones (released files only)

  Bianca-Morris

  committed
  8ac021c

  Copy full SHA for 8ac021c

• Re-add alerts to Browse View

  Bianca-Morris

  committed
  b31df48

  Copy full SHA for b31df48

• Add some static breadcrumbs

  Bianca-Morris

  committed
  2fc47ee

  Copy full SHA for 2fc47ee

• Disable browse links for unimplemented item types

  Bianca-Morris

  committed
  790a85f

  Copy full SHA for 790a85f

• Improve styling on tablet and mobile

  Bianca-Morris

  committed
  fda2b10

  Copy full SHA for fda2b10

• Bugfix for first column styling when customizing columns

  Bianca-Morris

  committed
  c083d6f

  Copy full SHA for c083d6f

• Add a bit to column definitions

  Bianca-Morris

  committed
  00c349f

  Copy full SHA for 00c349f

• Styling fixes for column alignment

  Bianca-Morris

  committed
  4311b1b

  Copy full SHA for 4311b1b

• Column additions and tweaks

  Bianca-Morris

  committed
  88d3137

  Copy full SHA for 88d3137

• add embed for donor and tissue information

  Bianca-Morris

  committed
  72e3280

  Copy full SHA for 72e3280

• Hide unnecessary facet

  Bianca-Morris

  committed
  bbc707e

  Copy full SHA for bbc707e

• update browse page defaults

  Bianca-Morris

  committed
  32ed41d

  Copy full SHA for 32ed41d

• Merge branch 'dmichaels-20241119-browse-view' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  d27a88f

  Copy full SHA for d27a88f

Commits on Dec 17, 2024

• add reference_genome embeds to file subtypes

  Bianca-Morris

  committed
  128fd89

  Copy full SHA for 128fd89

• Tweak file embeds

  Bianca-Morris

  committed
  6c9e25c

  Copy full SHA for 6c9e25c

• Adjust scss to use new source of tissue display title

  Bianca-Morris

  committed
  257d8f4

  Copy full SHA for 257d8f4

• Add additional facets to file for browse search

  Bianca-Morris

  committed
  253c755

  Copy full SHA for 253c755

• Adjustments to columns and facets + statistics loading

  Bianca-Morris

  committed
  44de938

  Copy full SHA for 44de938

• Rework navbar

  Bianca-Morris

  committed
  936576e

  Copy full SHA for 936576e

• Navbar tweaks

  Bianca-Morris

  committed
  5c346ea

  Copy full SHA for 5c346ea

• Swap to Production

  Bianca-Morris

  committed
  bfd528d

  Copy full SHA for bfd528d

• update SPC to 0.1.92b1

  Bianca-Morris

  committed
  897ded7

  Copy full SHA for 897ded7

• Fix for header bg styling bug

  Bianca-Morris

  committed
  c2b2ec7

  Copy full SHA for c2b2ec7

• add data attribute for current at-type to body + fix for error styling bugs

  Bianca-Morris

  committed
  58dee36

  Copy full SHA for 58dee36

Commits on Dec 18, 2024

• Move some things around for sake of cleanliness

  Bianca-Morris

  committed
  e3f5fcd

  Copy full SHA for e3f5fcd

• Clean up logs + make session refresh view

  Bianca-Morris

  committed
  c258bd4

  Copy full SHA for c258bd4

• Fix for search table arrow weirdness on browse view

  Bianca-Morris

  committed
  f473c0a

  Copy full SHA for f473c0a

• Nav tweaks

  Bianca-Morris

  committed
  f213ee6

  Copy full SHA for f213ee6

• Use new version of valueTransforms.byteToLargerUnit (needs version bump of SPC)

  Bianca-Morris

  committed
  280031a

  Copy full SHA for 280031a

• Tweak benchmarking nav titles

  Bianca-Morris

  committed
  650d824

  Copy full SHA for 650d824

• Update breadcrumb copy + add comment

  Bianca-Morris

  committed
  7b30039

  Copy full SHA for 7b30039

• bump SPC to 0.1.92b2

  Bianca-Morris

  committed
  615b7f0

  Copy full SHA for 615b7f0

• Add support for reference_genome to output, reference, variantcalls files

  Bianca-Morris

  committed
  a4b2df5

  Copy full SHA for a4b2df5

Commits on Dec 19, 2024

• Tweak to donor.sex & .age facet fields; add data_category, data_type

  Bianca-Morris

  committed
  9b61739

  Copy full SHA for 9b61739

Commits on Dec 20, 2024

• Remove tier 2 from homepage; rename remaining tiers

  Bianca-Morris

  committed
  9a5cf21

  Copy full SHA for 9a5cf21

• Keep TimelineAccordion drawers open when re-selecting

  Bianca-Morris

  committed
  b6c22df

  Copy full SHA for b6c22df

• Tweaks to activeKey & defaultActiveKey to support array

  Bianca-Morris

  committed
  4102b55

  Copy full SHA for 4102b55

• Merge branch 'dmichaels-20241119-browse-view' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  78594c0

  Copy full SHA for 78594c0

Commits on Jan 2, 2025

• bump SPC 0.1.92b3 (fixes 4DN-CGAP style issues)

  utku-ozturk

  committed
  62358f0

  Copy full SHA for 62358f0

Commits on Jan 9, 2025

• Set sidebar to start collapsed on production page

  Bianca-Morris

  committed
  63f7dac

  Copy full SHA for 63f7dac

• Make sidebar nav smaller

  Bianca-Morris

  committed
  4aa815e

  Copy full SHA for 4aa815e

• Data summary styling changes

  Bianca-Morris

  committed
  11c42e1

  Copy full SHA for 11c42e1

• Table and Facet Changes

  Bianca-Morris

  committed
  b3d3c61

  Copy full SHA for b3d3c61

• Update nav bar icons

  Bianca-Morris

  committed
  3107d70

  Copy full SHA for 3107d70

• Make the gap absolutely friggin gigantic

  Bianca-Morris

  committed
  e54bfd2

  Copy full SHA for e54bfd2

• Tweak for dropdown menu file size

  Bianca-Morris

  committed
  41ec6f8

  Copy full SHA for 41ec6f8

• Merge branch 'bm-browse-view' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  00132a4

  Copy full SHA for 00132a4

• Merge branch 'dmichaels-20241119-browse-view' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  24d2825

  Copy full SHA for 24d2825

• Merge branch 'main' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  c70ec72

  Copy full SHA for c70ec72

• Remove outdated comment

  Bianca-Morris

  committed
  9e92313

  Copy full SHA for 9e92313

Commits on Jan 13, 2025

• Styling tweaks + add image

  Bianca-Morris

  committed
  fb4e716

  Copy full SHA for fb4e716

• Remove tier from nav

  Bianca-Morris

  committed
  a9aee00

  Copy full SHA for a9aee00

• Additional tweaks

  Bianca-Morris

  committed
  f81aa88

  Copy full SHA for f81aa88

• Bump SPC to official version of 0.1.92

  Bianca-Morris

  committed
  c0efa18

  Copy full SHA for c0efa18

• Merge branch 'main' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  3f8e8fc

  Copy full SHA for 3f8e8fc

• Remove beta from pyproject.toml

  Bianca-Morris

  committed
  a1f43eb

  Copy full SHA for a1f43eb

• Fix for donor age ranges + double labels

  Bianca-Morris

  committed
  1c37730

  Copy full SHA for 1c37730

• swap file_sets.libraries.analytes.samples.sample_sources.donor.age to donor.age again

  Bianca-Morris

  committed
  0dfb911

  Copy full SHA for 0dfb911

• Fix pyproject.toml

  Bianca-Morris

  committed
  1027ef4

  Copy full SHA for 1027ef4

Commits on Jan 16, 2025

• fix facet

  willronchetti

  committed
  03dbfcb

  Copy full SHA for 03dbfcb

Commits on Jan 23, 2025

• tweak donor age facet

  Bianca-Morris

  committed
  f78e51b

  Copy full SHA for f78e51b

• Merge branch 'main' of https://github.com/smaht-dac/smaht-portal into bm-browse-view

  Bianca-Morris

  committed
  1f83cfa

  Copy full SHA for 1f83cfa

• Slight adjusments to changelog

  Bianca-Morris

  committed
  d1ae2b5

  Copy full SHA for d1ae2b5

• Cesar review tweaks + changelog update

  Bianca-Morris

  committed
  1f11cfc

  Copy full SHA for 1f11cfc