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[REVIEW]: elmada: Dynamic electricity carbon emission factors and prices for Europe #3625

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whedon opened this issue Aug 18, 2021 · 65 comments
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@whedon
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whedon commented Aug 18, 2021

Submitting author: @mfleschutz (Markus Fleschutz)
Repository: https://github.com/DrafProject/elmada
Version: v0.1.0
Editor: @fraukewiese
Reviewer: @nmstreethran, @olejandro
Archive: 10.5281/zenodo.5566694

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/9a6bf04b8a7bbc6b29b2ad79103acf42"><img src="https://joss.theoj.org/papers/9a6bf04b8a7bbc6b29b2ad79103acf42/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/9a6bf04b8a7bbc6b29b2ad79103acf42/status.svg)](https://joss.theoj.org/papers/9a6bf04b8a7bbc6b29b2ad79103acf42)

Reviewers and authors:

Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) by leaving comments in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)

Reviewer instructions & questions

@nmstreethran & @olejandro , please carry out your review in this issue by updating the checklist below. If you cannot edit the checklist please:

  1. Make sure you're logged in to your GitHub account
  2. Be sure to accept the invite at this URL: https://github.com/openjournals/joss-reviews/invitations

The reviewer guidelines are available here: https://joss.readthedocs.io/en/latest/reviewer_guidelines.html. Any questions/concerns please let @fraukewiese know.

Please start on your review when you are able, and be sure to complete your review in the next six weeks, at the very latest

Review checklist for @nmstreethran

✨ Important: Please do not use the Convert to issue functionality when working through this checklist, instead, please open any new issues associated with your review in the software repository associated with the submission. ✨

Conflict of interest

  • I confirm that I have read the JOSS conflict of interest (COI) policy and that: I have no COIs with reviewing this work or that any perceived COIs have been waived by JOSS for the purpose of this review.

Code of Conduct

General checks

  • Repository: Is the source code for this software available at the repository url?
  • License: Does the repository contain a plain-text LICENSE file with the contents of an OSI approved software license?
  • Contribution and authorship: Has the submitting author (@mfleschutz) made major contributions to the software? Does the full list of paper authors seem appropriate and complete?
  • Substantial scholarly effort: Does this submission meet the scope eligibility described in the JOSS guidelines

Functionality

  • Installation: Does installation proceed as outlined in the documentation?
  • Functionality: Have the functional claims of the software been confirmed?
  • Performance: If there are any performance claims of the software, have they been confirmed? (If there are no claims, please check off this item.)

Documentation

  • A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
  • Installation instructions: Is there a clearly-stated list of dependencies? Ideally these should be handled with an automated package management solution.
  • Example usage: Do the authors include examples of how to use the software (ideally to solve real-world analysis problems).
  • Functionality documentation: Is the core functionality of the software documented to a satisfactory level (e.g., API method documentation)?
  • Automated tests: Are there automated tests or manual steps described so that the functionality of the software can be verified?
  • Community guidelines: Are there clear guidelines for third parties wishing to 1) Contribute to the software 2) Report issues or problems with the software 3) Seek support

Software paper

  • Summary: Has a clear description of the high-level functionality and purpose of the software for a diverse, non-specialist audience been provided?
  • A statement of need: Does the paper have a section titled 'Statement of Need' that clearly states what problems the software is designed to solve and who the target audience is?
  • State of the field: Do the authors describe how this software compares to other commonly-used packages?
  • Quality of writing: Is the paper well written (i.e., it does not require editing for structure, language, or writing quality)?
  • References: Is the list of references complete, and is everything cited appropriately that should be cited (e.g., papers, datasets, software)? Do references in the text use the proper citation syntax?

Review checklist for @olejandro

✨ Important: Please do not use the Convert to issue functionality when working through this checklist, instead, please open any new issues associated with your review in the software repository associated with the submission. ✨

Conflict of interest

  • I confirm that I have read the JOSS conflict of interest (COI) policy and that: I have no COIs with reviewing this work or that any perceived COIs have been waived by JOSS for the purpose of this review.

Code of Conduct

General checks

  • Repository: Is the source code for this software available at the repository url?
  • License: Does the repository contain a plain-text LICENSE file with the contents of an OSI approved software license?
  • Contribution and authorship: Has the submitting author (@mfleschutz) made major contributions to the software? Does the full list of paper authors seem appropriate and complete?
  • Substantial scholarly effort: Does this submission meet the scope eligibility described in the JOSS guidelines

Functionality

  • Installation: Does installation proceed as outlined in the documentation?
  • Functionality: Have the functional claims of the software been confirmed?
  • Performance: If there are any performance claims of the software, have they been confirmed? (If there are no claims, please check off this item.)

Documentation

  • A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
  • Installation instructions: Is there a clearly-stated list of dependencies? Ideally these should be handled with an automated package management solution.
  • Example usage: Do the authors include examples of how to use the software (ideally to solve real-world analysis problems).
  • Functionality documentation: Is the core functionality of the software documented to a satisfactory level (e.g., API method documentation)?
  • Automated tests: Are there automated tests or manual steps described so that the functionality of the software can be verified?
  • Community guidelines: Are there clear guidelines for third parties wishing to 1) Contribute to the software 2) Report issues or problems with the software 3) Seek support

Software paper

  • Summary: Has a clear description of the high-level functionality and purpose of the software for a diverse, non-specialist audience been provided?
  • A statement of need: Does the paper have a section titled 'Statement of Need' that clearly states what problems the software is designed to solve and who the target audience is?
  • State of the field: Do the authors describe how this software compares to other commonly-used packages?
  • Quality of writing: Is the paper well written (i.e., it does not require editing for structure, language, or writing quality)?
  • References: Is the list of references complete, and is everything cited appropriately that should be cited (e.g., papers, datasets, software)? Do references in the text use the proper citation syntax?
@whedon
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whedon commented Aug 18, 2021

Hello human, I'm @whedon, a robot that can help you with some common editorial tasks. @nmstreethran, @olejandro it looks like you're currently assigned to review this paper 🎉.

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

⭐ Important ⭐

If you haven't already, you should seriously consider unsubscribing from GitHub notifications for this (https://github.com/openjournals/joss-reviews) repository. As a reviewer, you're probably currently watching this repository which means for GitHub's default behaviour you will receive notifications (emails) for all reviews 😿

To fix this do the following two things:

  1. Set yourself as 'Not watching' https://github.com/openjournals/joss-reviews:

watching

  1. You may also like to change your default settings for this watching repositories in your GitHub profile here: https://github.com/settings/notifications

notifications

For a list of things I can do to help you, just type:

@whedon commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@whedon generate pdf

@whedon
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whedon commented Aug 18, 2021

Failed to discover a Statement of need section in paper

@whedon
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whedon commented Aug 18, 2021

Wordcount for paper.md is 480

@whedon
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whedon commented Aug 18, 2021

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1016/j.apenergy.2021.117040 is OK
- 10.5281/zenodo.5126771 is OK

MISSING DOIs

- None

INVALID DOIs

- None

@whedon
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whedon commented Aug 18, 2021

Software report (experimental):

github.com/AlDanial/cloc v 1.88  T=0.21 s (246.4 files/s, 63359.9 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
SVG                              5              0             33           7892
Python                          32            922            423           2832
Markdown                         5            190              0            523
YAML                             4              9              4            120
HTML                             1              7              0             51
TeX                              1              5              0             45
JSON                             1              0              0             28
TOML                             1              1              1             18
INI                              1              0              2             10
-------------------------------------------------------------------------------
SUM:                            51           1134            463          11519
-------------------------------------------------------------------------------


Statistical information for the repository '66bc415bf7ea5b9ab9c9473b' was
gathered on 2021/08/18.
The following historical commit information, by author, was found:

Author                     Commits    Insertions      Deletions    % of changes
flma0001                        47          6784           2607          100.00

Below are the number of rows from each author that have survived and are still
intact in the current revision:

Author                     Rows      Stability          Age       % in comments
flma0001                   4177           61.6          1.2                7.21

@whedon
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whedon commented Aug 18, 2021

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

@fraukewiese
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@olejandro , @nmstreethran – This is the review thread for the paper. All of our communications will happen here from now on.

Please read the "Reviewer instructions & questions" in the first comment above.

Both reviewers have checklists at the top of this thread (in that first comment) with the JOSS requirements. As you go over the submission, please check any items that you feel have been satisfied. There are also links to the JOSS reviewer guidelines.

The JOSS review is different from most other journals. Our goal is to work with the authors to help them meet our criteria instead of merely passing judgment on the submission. As such, the reviewers are encouraged to submit issues and pull requests on the software repository. When doing so, please mention #3625 so that a link is created to this thread (and I can keep an eye on what is happening). Please also feel free to comment and ask questions on this thread. In my experience, it is better to post comments/questions/suggestions as you come across them instead of waiting until you've reviewed the entire package.

We aim for the review process to be completed within about 4-6 weeks but please make a start well ahead of this as JOSS reviews are by their nature iterative and any early feedback you may be able to provide to the author will be very helpful in meeting this schedule.

@fraukewiese
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@mfleschutz : Please include a Statement of Need section in the paper of the submission

mfleschutz added a commit to DrafProject/elmada that referenced this issue Aug 23, 2021
@fraukewiese
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fraukewiese commented Aug 23, 2021

@whedon generate pdf

@mfleschutz
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Thank you, @fraukewiese. I restructured and updated the paper.

@fraukewiese
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@whedon generate pdf

@whedon
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whedon commented Aug 23, 2021

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

@fraukewiese
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@nmstreethran, @olejandro : If you have any further questions regarding the review, do not hesitate to ask :)

@whedon
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whedon commented Sep 1, 2021

👋 @nmstreethran, please update us on how your review is going (this is an automated reminder).

@whedon
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whedon commented Sep 1, 2021

👋 @olejandro , please update us on how your review is going (this is an automated reminder).

@olejandro
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Thanks, @fraukewiese! :-)

@mfleschutz
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Thank you @nmstreethran for your valuable feedback in DrafProject/elmada/issues/1. I hope the testing options are clearer now.

@fraukewiese
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Sorry for mentioning this issue in another one, that was a mistake and I cannot delete it anymore, so please just ignore the HydDown: ... mentioning in this review here.

@fraukewiese
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@olejandro , please update us on how your review is going :)

@whedon
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whedon commented Oct 14, 2021

OK. v0.1.0 is the version.

@fraukewiese
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Congratulation to releasing v0.1.0 @mfleschutz !
Please make sure that the title and author list in the archive on zenodo is exactly matching the paper title and author list. If you want to make Michael D. Murphy co-author, please add his name also in the archive.

mfleschutz added a commit to DrafProject/elmada that referenced this issue Oct 14, 2021
@mfleschutz
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Okay, thanks @fraukewiese. I updated the Zenodo metadata to match the paper title and author list. Also, I added the Zenodo DOI in the JOSS paper references and codemeta.json.

@mfleschutz
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@whedon generate pdf

@whedon
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whedon commented Oct 14, 2021

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

@fraukewiese
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@whedon set 10.5281/zenodo.5566694 as archive

@whedon
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whedon commented Oct 15, 2021

OK. 10.5281/zenodo.5566694 is the archive.

@fraukewiese
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@whedon recommend-accept

@whedon
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whedon commented Oct 15, 2021

Attempting dry run of processing paper acceptance...

@whedon whedon added the recommend-accept Papers recommended for acceptance in JOSS. label Oct 15, 2021
@whedon
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whedon commented Oct 15, 2021

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1016/j.apenergy.2021.117040 is OK
- 10.5281/zenodo.5566694 is OK
- 10.1016/j.rser.2020.109917 is OK
- 10.1016/j.enpol.2010.05.053 is OK
- 10.1016/j.esr.2019.100367 is OK

MISSING DOIs

- None

INVALID DOIs

- None

@whedon
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whedon commented Oct 15, 2021

👋 @openjournals/joss-eics, this paper is ready to be accepted and published.

Check final proof 👉 openjournals/joss-papers#2676

If the paper PDF and Crossref deposit XML look good in openjournals/joss-papers#2676, then you can now move forward with accepting the submission by compiling again with the flag deposit=true e.g.

@whedon accept deposit=true

@arfon
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arfon commented Oct 15, 2021

@whedon accept deposit=true

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whedon commented Oct 15, 2021

Doing it live! Attempting automated processing of paper acceptance...

@whedon whedon added accepted published Papers published in JOSS labels Oct 15, 2021
@whedon
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whedon commented Oct 15, 2021

🐦🐦🐦 👉 Tweet for this paper 👈 🐦🐦🐦

@whedon
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whedon commented Oct 15, 2021

🚨🚨🚨 THIS IS NOT A DRILL, YOU HAVE JUST ACCEPTED A PAPER INTO JOSS! 🚨🚨🚨

Here's what you must now do:

  1. Check final PDF and Crossref metadata that was deposited 👉 Creating pull request for 10.21105.joss.03625 joss-papers#2678
  2. Wait a couple of minutes, then verify that the paper DOI resolves https://doi.org/10.21105/joss.03625
  3. If everything looks good, then close this review issue.
  4. Party like you just published a paper! 🎉🌈🦄💃👻🤘

Any issues? Notify your editorial technical team...

@arfon
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arfon commented Oct 15, 2021

@nmstreethran, @olejandro – many thanks for your reviews here and to @fraukewiese for editing this submission! JOSS relies upon the volunteer effort of people like you and we simply wouldn't be able to do this without you ✨

@mfleschutz – your paper is now accepted and published in JOSS ⚡🚀💥

@arfon arfon closed this as completed Oct 15, 2021
@whedon
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whedon commented Oct 15, 2021

🎉🎉🎉 Congratulations on your paper acceptance! 🎉🎉🎉

If you would like to include a link to your paper from your README use the following code snippets:

Markdown:
[![DOI](https://joss.theoj.org/papers/10.21105/joss.03625/status.svg)](https://doi.org/10.21105/joss.03625)

HTML:
<a style="border-width:0" href="https://doi.org/10.21105/joss.03625">
  <img src="https://joss.theoj.org/papers/10.21105/joss.03625/status.svg" alt="DOI badge" >
</a>

reStructuredText:
.. image:: https://joss.theoj.org/papers/10.21105/joss.03625/status.svg
   :target: https://doi.org/10.21105/joss.03625

This is how it will look in your documentation:

DOI

We need your help!

Journal of Open Source Software is a community-run journal and relies upon volunteer effort. If you'd like to support us please consider doing either one (or both) of the the following:

@mfleschutz
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Exciting! Again, thank you @nmstreethran, @olejandro, @fraukewiese, and @arfon for your efforts.

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