[skip ci] Dev -> Master for 3.15.0#1258
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pinin4fjords merged 831 commits intomasterfrom devSep 5, 2024
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@aanil (Anandashankar Anil) correctly pointed out that some MultiQC configuration parameters used in the config were deprecated.
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Merge branch 'factor_out_preprocessing' of https://github.com/nf-core/rnaseq into factor_out_preprocessing
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