⬆️ Combined updates (#884)

⬆️ Batch updating dependencies

- Bump click from 8.0.1 to 8.0.3 #865
- Bump pyyaml from 5.4.1 to 6.0 #863
- Bump scipy from 1.7.0 to 1.7.1 #761
- Bump actions/github-script from 4 to 5 #845
- Bump rich from 10.9.0 to 10.12.0 #850

.github/workflows/binder-on-pr.yml

@@ -12,13 +12,13 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: comment on PR with Binder link
-        uses: actions/github-script@v4
+        uses: actions/github-script@v5
         with:
           github-token: ${{secrets.GITHUB_TOKEN}}
           script: |
             var PR_HEAD_USERREPO = process.env.PR_HEAD_USERREPO;
             var PR_HEAD_REF = process.env.PR_HEAD_REF;
-            github.issues.createComment({
+            github.rest.issues.createComment({
               issue_number: context.issue.number,
               owner: context.repo.owner,
               repo: context.repo.repo,

.github/workflows/pr_benchmark_reaction.yml

@@ -17,7 +17,7 @@ jobs:
       github.event.workflow_run.conclusion == 'success' }}
     steps:
       - name: Download artifact
-        uses: actions/github-script@v3.1.0
+        uses: actions/github-script@v5
         with:
           script: |
             var artifacts = await github.actions.listWorkflowRunArtifacts({

requirements_dev.txt

@@ -5,12 +5,12 @@ wheel>=0.30.0
 # glotaran setup dependencies
 asteval==0.9.25
 numpy==1.20.3
-scipy==1.7.0
-click==8.0.1
-rich==10.9.0
+scipy==1.7.1
+click==8.0.3
+rich==10.12.0
 numba==0.54.1
 pandas==1.3.4
-pyyaml==5.4.1
+pyyaml==6.0
 xarray==0.19.0
 netCDF4==1.5.7
 setuptools==41.2