Miniprot Update version v0.10 to v0.12

[rlibouba]

FOR CONTRIBUTOR:

• - I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
• - License permits unrestricted use (educational + commercial)
• - This PR adds a new tool or tool collection
• - This PR updates an existing tool or tool collection
• - This PR does something else (explain below)

[bgruening]

Cool thanks! Looks very good!

[bernt-matthias]

Can you add a test covering the --trans parameter?

[bernt-matthias]

Seems that the --trans adds a comment line (which is an important detail) ## STA\t... followed by the translation.

There seem to be an additional line containing "tr|I6YGH7|I6YGH7_MYCTU" .. which seems incompatible with the gtf definition... is this desired (and is this due to --trans?)

[rlibouba]

I did a test on each output format of the new feature. I also put in the test-data folder, an example of output with the --trans parameter

[rlibouba]

I've added a comment in the script to warn of the bug while waiting for the new realease.

[bgruening]

@rlibouba do you expect a release in the next days? Would we maybe hide the --trans parameter to not get user questions about this bug?

[rlibouba]

No, I don't have any information about the fix. I check regularly.
We can hide it in the meantime. What do you think @bernt-matthias and @abretaud ?

[bernt-matthias]

Hiding the option (i.e. commenting) would be fine for me .. up to you.

[abretaud]

It's ok for me to hide it

[rlibouba]

Thank you for your feedback. I've hidden the parameter until the bug is fixed.

[rlibouba]

A new version is now available. As soon as the conda package is up to date, I'll add the new features added by this update

[bgruening]

Cool very nice @rlibouba!

@bernt-matthias ready from your side?

[bernt-matthias]

Thanks a lot @rlibouba!