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44 Open 25 Closed
44 Open 25 Closed
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Issues list

No variant detected
#139 opened Sep 18, 2024 by Jiayi-Wang-Joey
Annotate CRAVAT error
#137 opened Aug 8, 2024 by QifengSun
1
Not able to run CTAT Mutations
#135 opened May 13, 2024 by mariasolruiz
38
mutation-lib supplement for GRCm39
#134 opened Apr 11, 2024 by cachedpotato
10
hg19 igv report html appears broken (works fine for hg38 though)
#132 opened Mar 25, 2024 by brianjohnhaas
dbSNP frequence question
#131 opened Feb 9, 2024 by teresa1997
1
Missing path to CTAT_GENOME_LIB
#130 opened Nov 17, 2023 by teresa1997
5
Issue with BQSR maximum cycle value
#129 opened Nov 16, 2023 by irzamsarfraz
1
allow for igv-reports if filtering set to none
#127 opened Sep 15, 2023 by brianjohnhaas
Annotate CRAVAT error
#126 opened Sep 10, 2023 by gianfilippo
18
zipfile.BadZipFile: File is not a zip file
#124 opened Dec 22, 2022 by wx904
3
Annotating VCF at BLAT ED
#123 opened Dec 13, 2022 by shivUSF
8
Not enough memory for BAM sorting
#122 opened Dec 10, 2022 by taot2007
5
Do I need spliced fastq?
#120 opened Dec 1, 2022 by HyojeenLee
AWS EC2 + docker and issue of cromwell or STAR
#119 opened Nov 30, 2022 by HyojeenLee
5
HaplotypeCaller - Intervals option
#118 opened Nov 27, 2022 by gremame
9
Could not run the test sample using ctat-mutations
#111 opened Oct 11, 2022 by DecodeGenome
3
subprocess.CalledProcessError
#110 opened Jul 11, 2022 by min0609
12
RNAEditing Analysis
#107 opened Jan 17, 2022 by kokyriakidis
17
File "/opt/conda/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd)
#106 opened Jan 13, 2022 by yuanqingyan
4
After "WaitingForReturnCode ", pipeline stuck
#105 opened Jan 11, 2022 by jaewon-cho
4
ctat-mutations-WorkflowFailedState
#104 opened Jan 9, 2022 by taot2007
5
internet connection error
#103 opened Nov 29, 2021 by jianbiaoli
5
question about the outputs
#102 opened Nov 16, 2021 by jaewon-cho
2
errors in mutation lib integration
#101 opened Nov 1, 2021 by aoifgri
5
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