Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: #19
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-use cfp with mpiexe -introduce FORT5 -move ksh interpreter
ShelleyMelchior-NOAA
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Jan 4, 2022
ush/prepobs_makeprepbufr.sh
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| @@ -1744,6 +1744,7 @@ backup AFWA ACARS into PREPBUFR" | |||
|
|
|||
| set +x | |||
| cat <<\EOFmpp > MP_PREPDATA | |||
| #!/bin/ksh | |||
| { echo | |||
| #!/bin/ksh | |||
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I think the #!/bin/ksh at line 1749 does not need to be here; Jack's addition at 1747 is correct.
| @@ -2114,7 +2117,8 @@ set -x | |||
| elif [ "$launcher_PREP" = mpiexec ]; then | |||
| chmod 755 $DATA/prep_exec.cmd | |||
| #mpiexec -n 6 -ppn 32 $DATA/prep_exec.cmd #IG | |||
| mpiexec -n 6 $DATA/prep_exec.cmd | |||
| # mpiexec -n 6 $DATA/prep_exec.cmd | |||
| mpiexec -n $NSPLIT cfp $DATA/prep_exec.cmd | |||
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@ilianagenkova please check our test run. Your test run is not using this new code. Your $HOMEobsproc is set to /u/Iliana.Genkova/INSTALLpre/obsproc and the ush/prepobs_makeprepbufr.sh there does not have Jack's changes in it. Can you re-run and be sure you are running w/ his changes? For reference, I am looking in /lfs/h2/emc/ptmp/Iliana.Genkova/obsproc_gfs_prep_JWool_20210824_06.o9937950
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commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18)
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commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18)
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commit 21d7d9a Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 13:30:52 2022 +0000 Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) commit e63a78c Author: Shelley Melchior <[email protected]> Date: Wed Jun 1 16:21:51 2022 +0000 Updated to correctly locate tcvitals file. commit 0bbb542 Author: Shelley Melchior <[email protected]> Date: Fri Apr 8 20:31:15 2022 +0000 Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods
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commit e379362 Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 14:38:13 2022 +0000 Squashed commit of the following: commit 21d7d9a Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 13:30:52 2022 +0000 Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) commit e63a78c Author: Shelley Melchior <[email protected]> Date: Wed Jun 1 16:21:51 2022 +0000 Updated to correctly locate tcvitals file. commit 0bbb542 Author: Shelley Melchior <[email protected]> Date: Fri Apr 8 20:31:15 2022 +0000 Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods
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commit dd5ec6e Author: Shelley Melchior <[email protected]> Date: Thu Jun 9 17:01:24 2022 +0000 Added export before definition of envir. commit 5609b1c Author: AshleyStanfield-NOAA <[email protected]> Date: Wed Jun 8 21:52:00 2022 -0400 Obsproc 'Module Load' order modifications (#39) * Modified order of modules, specifically bufr-dump and prepobs. * More shifts and changes. * More adjustements, shifted added lines slightly, fixed bugs. * Added in module unload phases. commit 21d7d9a Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 13:30:52 2022 +0000 Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) commit e63a78c Author: Shelley Melchior <[email protected]> Date: Wed Jun 1 16:21:51 2022 +0000 Updated to correctly locate tcvitals file. commit 0bbb542 Author: Shelley Melchior <[email protected]> Date: Fri Apr 8 20:31:15 2022 +0000 Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods
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* Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT * Added section to cd to logfile output dir prior to process submission. * Squashed commit of the following: commit 21d7d9a Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 13:30:52 2022 +0000 Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) commit e63a78c Author: Shelley Melchior <[email protected]> Date: Wed Jun 1 16:21:51 2022 +0000 Updated to correctly locate tcvitals file. commit 0bbb542 Author: Shelley Melchior <[email protected]> Date: Fri Apr 8 20:31:15 2022 +0000 Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods Co-authored-by: iliana Genkova <[email protected]> Co-authored-by: Shelley Melchior <[email protected]>
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* Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods * Updated to correctly locate tcvitals file. * Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) * Obsproc 'Module Load' order modifications (#39) * Modified order of modules, specifically bufr-dump and prepobs. * More shifts and changes. * More adjustements, shifted added lines slightly, fixed bugs. * Added in module unload phases. * Added export before definition of envir. * Including NCO changes for consideration to be incorporated into (#41) release/obsproc.v1.0.0. * Fixed a bug in JOBSPROC_AIRNOW_DUMP (#45) Looks good. NCO will run test in para or test and then issue ARFC to be in place prior to go-live (6/28/2022) * correct airnow processing when run by NCO (#48) * Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO. * Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO. * Corrected two triggers (#49) Co-authored-by: Shelley Melchior <[email protected]> Co-authored-by: AshleyStanfield-NOAA <[email protected]> Co-authored-by: Shelley Melchior <[email protected]>
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commit e741467 Merge: 055b5d5 e379362 Author: iliana Genkova <[email protected]> Date: Wed Jun 22 18:14:55 2022 -0500 Merge branch 'develop' into release/obsproc.v1.0.0 commit 055b5d5 Author: iliana Genkova <[email protected]> Date: Wed Jun 22 18:10:59 2022 -0500 Corrected two triggers (#49) commit 6cc9cd7 Author: Shelley Melchior <[email protected]> Date: Wed Jun 22 19:10:05 2022 -0400 correct airnow processing when run by NCO (#48) * Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO. * Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO. commit e379362 Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 14:38:13 2022 +0000 Squashed commit of the following: commit 21d7d9a Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 13:30:52 2022 +0000 Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) commit e63a78c Author: Shelley Melchior <[email protected]> Date: Wed Jun 1 16:21:51 2022 +0000 Updated to correctly locate tcvitals file. commit 0bbb542 Author: Shelley Melchior <[email protected]> Date: Fri Apr 8 20:31:15 2022 +0000 Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18)
ilianagenkova
added a commit
that referenced
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Jul 3, 2022
* Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods * Updated to correctly locate tcvitals file. * Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) * Obsproc 'Module Load' order modifications (#39) * Modified order of modules, specifically bufr-dump and prepobs. * More shifts and changes. * More adjustements, shifted added lines slightly, fixed bugs. * Added in module unload phases. * Added export before definition of envir. * Including NCO changes for consideration to be incorporated into (#41) release/obsproc.v1.0.0. * Fixed a bug in JOBSPROC_AIRNOW_DUMP (#45) Looks good. NCO will run test in para or test and then issue ARFC to be in place prior to go-live (6/28/2022) * correct airnow processing when run by NCO (#48) * Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO. * Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO. * Corrected two triggers (#49) * ecf change communicated by NCO Co-authored-by: Shelley Melchior <[email protected]> Co-authored-by: AshleyStanfield-NOAA <[email protected]> Co-authored-by: Shelley Melchior <[email protected]>
ilianagenkova
added a commit
that referenced
this pull request
Jul 5, 2022
* Add override into cdate10 setting exglobal_makeprepbufr.sh (#37) - allows entry for global-workflow to pass in cycle value when outside of operational environment - global-workflow config.prep will set cdate10 using $PDY$cyc - tested and works on Orion Refs: #34 * Develop sync and tcvitals bug fix updates for obsproc (#43) * Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT * Added section to cd to logfile output dir prior to process submission. * Squashed commit of the following: commit 21d7d9a Author: Shelley Melchior <[email protected]> Date: Thu Jun 2 13:30:52 2022 +0000 Squashed commit of the following: commit daff5af Author: Shelley Melchior <[email protected]> Date: Fri May 27 18:05:05 2022 +0000 Added section to cd to logfile output dir prior to process submission. commit 30c01f9 Author: iliana Genkova <[email protected]> Date: Tue May 24 11:37:06 2022 -0500 Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38) * Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 * Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT commit ebb6c68 Author: Cory Martin <[email protected]> Date: Tue Apr 12 15:15:47 2022 -0400 Changes needed to build on Hera (#32) commit 0075564 Author: Shelley Melchior <[email protected]> Date: Sat Apr 9 17:07:10 2022 -0400 Incorporating changes made by NCO SPA following: (#35) restart of cactus and changing output data directory for mods commit 59596a9 Author: Shelley Melchior <[email protected]> Date: Thu Apr 7 21:27:40 2022 +0000 Removing top level README.md. This file now resides in docs/. commit 735f009 Merge: bd4211a 8f28c00 Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:51:34 2022 +0000 Merge branch 'release/obsproc.v1.0.0' into develop commit 8f28c00 Merge: f01f691 bd4211a Author: Iliana Genkova <[email protected]> Date: Thu Apr 7 20:49:01 2022 +0000 Removed build.sh (now in /build-obsproc) and ush/prepobs_makeprepbufr.sh(now in module prepobs) Merge branch 'develop' into release/obsproc.v1.0.0 commit bd4211a Author: iliana Genkova <[email protected]> Date: Mon Jan 3 19:23:04 2022 -0600 Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19) * Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: -use cfp with mpiexe -introduce FORT5 -move ksh interpreter * Clean up interpreter commit 309371d Author: Shelley Melchior <[email protected]> Date: Mon Jan 3 18:25:21 2022 -0500 created README.md Created README.md to better explain installation instructions, modified to adopt NCO's working practices. commit c5342eb Author: Rahul Mahajan <[email protected]> Date: Mon Jan 3 17:57:29 2022 -0500 adopt for current NCO working practices per discussion w/ StevenEarle et al (#18) commit e63a78c Author: Shelley Melchior <[email protected]> Date: Wed Jun 1 16:21:51 2022 +0000 Updated to correctly locate tcvitals file. commit 0bbb542 Author: Shelley Melchior <[email protected]> Date: Fri Apr 8 20:31:15 2022 +0000 Incorporating changes made by NCO SPA following: restart of cactus and changing output data directory for mods Co-authored-by: iliana Genkova <[email protected]> Co-authored-by: Shelley Melchior <[email protected]> * Update prepobs_ver to 1.0.1 Co-authored-by: iliana Genkova <[email protected]> Co-authored-by: Shelley Melchior <[email protected]>
ilianagenkova
pushed a commit
that referenced
this pull request
Jul 28, 2022
* Updated COMIN when JOBSPROC_AIRNOW_DUMP is run by non-NCO user to not
inherit previous definition for COMIN.
* Updated COMIN when JOBSPROC_AIRNOW_DUMP is run by non-NCO user to not
inherit previous definition for COMIN.
* Squashed commit of the following:
commit e741467
Merge: 055b5d5 e379362
Author: iliana Genkova <[email protected]>
Date: Wed Jun 22 18:14:55 2022 -0500
Merge branch 'develop' into release/obsproc.v1.0.0
commit 055b5d5
Author: iliana Genkova <[email protected]>
Date: Wed Jun 22 18:10:59 2022 -0500
Corrected two triggers (#49)
commit 6cc9cd7
Author: Shelley Melchior <[email protected]>
Date: Wed Jun 22 19:10:05 2022 -0400
correct airnow processing when run by NCO (#48)
* Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO.
* Updating JOBSPROC_AIRNOW_DUMP to work correctly when user is NCO.
commit e379362
Author: Shelley Melchior <[email protected]>
Date: Thu Jun 2 14:38:13 2022 +0000
Squashed commit of the following:
commit 21d7d9a
Author: Shelley Melchior <[email protected]>
Date: Thu Jun 2 13:30:52 2022 +0000
Squashed commit of the following:
commit daff5af
Author: Shelley Melchior <[email protected]>
Date: Fri May 27 18:05:05 2022 +0000
Added section to cd to logfile output dir prior to process submission.
commit 30c01f9
Author: iliana Genkova <[email protected]>
Date: Tue May 24 11:37:06 2022 -0500
Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38)
* Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2
* Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT
commit ebb6c68
Author: Cory Martin <[email protected]>
Date: Tue Apr 12 15:15:47 2022 -0400
Changes needed to build on Hera (#32)
commit 0075564
Author: Shelley Melchior <[email protected]>
Date: Sat Apr 9 17:07:10 2022 -0400
Incorporating changes made by NCO SPA following: (#35)
restart of cactus and
changing output data directory for mods
commit 59596a9
Author: Shelley Melchior <[email protected]>
Date: Thu Apr 7 21:27:40 2022 +0000
Removing top level README.md. This file now resides in docs/.
commit 735f009
Merge: bd4211a 8f28c00
Author: Iliana Genkova <[email protected]>
Date: Thu Apr 7 20:51:34 2022 +0000
Merge branch 'release/obsproc.v1.0.0' into develop
commit 8f28c00
Merge: f01f691 bd4211a
Author: Iliana Genkova <[email protected]>
Date: Thu Apr 7 20:49:01 2022 +0000
Removed build.sh (now in /build-obsproc) and
ush/prepobs_makeprepbufr.sh(now in module prepobs)
Merge branch 'develop' into release/obsproc.v1.0.0
commit bd4211a
Author: iliana Genkova <[email protected]>
Date: Mon Jan 3 19:23:04 2022 -0600
Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19)
* Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh:
-use cfp with mpiexe -introduce FORT5 -move ksh interpreter
* Clean up interpreter
commit 309371d
Author: Shelley Melchior <[email protected]>
Date: Mon Jan 3 18:25:21 2022 -0500
created README.md
Created README.md to better explain installation instructions, modified to adopt NCO's working practices.
commit c5342eb
Author: Rahul Mahajan <[email protected]>
Date: Mon Jan 3 17:57:29 2022 -0500
adopt for current NCO working practices per discussion w/ StevenEarle et al (#18)
commit e63a78c
Author: Shelley Melchior <[email protected]>
Date: Wed Jun 1 16:21:51 2022 +0000
Updated to correctly locate tcvitals file.
commit 0bbb542
Author: Shelley Melchior <[email protected]>
Date: Fri Apr 8 20:31:15 2022 +0000
Incorporating changes made by NCO SPA following:
restart of cactus and
changing output data directory for mods
commit daff5af
Author: Shelley Melchior <[email protected]>
Date: Fri May 27 18:05:05 2022 +0000
Added section to cd to logfile output dir prior to process submission.
commit 30c01f9
Author: iliana Genkova <[email protected]>
Date: Tue May 24 11:37:06 2022 -0500
Set obsproc_ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2 (#38)
* Set obsproc+ver=v1.0 and HOMEgfs=$COMROOT/gfs/v16.2
* Introduce 3-digit obsproc_ver_pckg and use with $PACKAGEROOT
commit ebb6c68
Author: Cory Martin <[email protected]>
Date: Tue Apr 12 15:15:47 2022 -0400
Changes needed to build on Hera (#32)
commit 0075564
Author: Shelley Melchior <[email protected]>
Date: Sat Apr 9 17:07:10 2022 -0400
Incorporating changes made by NCO SPA following: (#35)
restart of cactus and
changing output data directory for mods
commit 59596a9
Author: Shelley Melchior <[email protected]>
Date: Thu Apr 7 21:27:40 2022 +0000
Removing top level README.md. This file now resides in docs/.
commit 735f009
Merge: bd4211a 8f28c00
Author: Iliana Genkova <[email protected]>
Date: Thu Apr 7 20:51:34 2022 +0000
Merge branch 'release/obsproc.v1.0.0' into develop
commit 8f28c00
Merge: f01f691 bd4211a
Author: Iliana Genkova <[email protected]>
Date: Thu Apr 7 20:49:01 2022 +0000
Removed build.sh (now in /build-obsproc) and
ush/prepobs_makeprepbufr.sh(now in module prepobs)
Merge branch 'develop' into release/obsproc.v1.0.0
commit bd4211a
Author: iliana Genkova <[email protected]>
Date: Mon Jan 3 19:23:04 2022 -0600
Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh: (#19)
* Adopt Jack Woolen's (CFS) faster prepobs_makeprepbufr.sh:
-use cfp with mpiexe -introduce FORT5 -move ksh interpreter
* Clean up interpreter
commit 309371d
Author: Shelley Melchior <[email protected]>
Date: Mon Jan 3 18:25:21 2022 -0500
created README.md
Created README.md to better explain installation instructions, modified to adopt NCO's working practices.
commit c5342eb
Author: Rahul Mahajan <[email protected]>
Date: Mon Jan 3 17:57:29 2022 -0500
adopt for current NCO working practices per discussion w/ StevenEarle et al (#18)
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The proposed changes speed up the JOBSPROC_*_PREP steps:
-use cfp and $NSPLIT with mpiexe command
-introduce
export FORT5=prepdata.stdin
-move ksh interpreter to top of MP_PREPDATA
Changes were tested with global and cdas networks