Migrate the postprocessing google doc users guide to this project wiki #4
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The CESM post processing documentation is now being maintained on this github wiki in reStructuredText format. It can be downloaded and run through sphinx (http://www.sphinx-doc.org/en/stable/) to generate HTML or PDF documents. |
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218b6e2 added some safety for if a confrontation is not found 6afbc13 added data information to the ilamb configure file 0ad8b7c Merge branch 'ncollier/bias-fix' 2d19ca0 added support for reversing the latitude dimension if found to be monotonically decreasing f46ac1e made calendar labels case insensitive and added support for conversion from julian aa120bc more tutorials 92b7b81 added a ilamb-doctor tutorial b83dd58 fix to the bias score for when the data min is equal to the data because there is only one site e3a016b Merge branch 'master' of bitbucket.org:ncollier/ilamb cbd0b8a added a check to make sure that lat/lon values fall between their bounds 83a8d92 tutorial additions f3e155b moved some links in the readme d37e945 added a tutorial for encoding datasets c89a7a1 added a padding to cylindrical plots 7980e9e fixed summary plot bug I introduced in previous commit d97332a added a relative only option for summary figures ccabd00 disable sorts if --model_setup is used eaaaf7d added support to link to relationships page cd3a4c5 allow errors in the netcdf region files to crash the process with a traceback b04d82e added relationship page and plot d571c67 relationship tables are functional c46faf0 first pass at relationship table 35d06c4 disable Hellinger distance 654cb44 added a --skip_plots option to ilamb-run (experimental) 0293485 add a trim to NBP so if we have more model info, it isn't used c4401dd neglected a import which my tests missed 6b0fda1 Merge branch 'ncollier/iomb-dev' e1c12ee slight score changes from changes in iomb-dev 812b3bb changes in time bounds require fixes in annual cycle e4a106f added a diurnal capability 91a600d changed default behavior for creating time bounds if none are present, now assumes time is at the end of the time interval ae7086b Merge branch 'ncollier/iomb-dev' of bitbucket.org:ncollier/ilamb into ncollier/iomb-dev 635ca0f disabled site output 83d9f69 fix new plotting projection for sites ffd193f fix new plotting projection for sites a80c45f Bugfix causing Taylor diagrams to show the same for each region. Thanks to Alberto Martínez-de la Torre for this submission 7dda76f Merge branch 'master' of bitbucket.org:ncollier/ilamb f630657 fixed file links in output files a3b5f7f restored a strip erroneously removed 9d7fcd3 moved to creating paths using os.path.join to avoid // in file paths 37d791d IOMB will now only work on surfaces if that is the model result present 3879cd6 fix on score plot limits f2cfe60 changes to plotting over regions to be data-based instead of region name 5142f95 rework to allow for clpping of the model extents 3af61aa fixed allmodels nameing of figures 87ebf43 added spatial Taylor diagrams 3efd465 first pass at finalizing iomb analysis 7a4a092 Merge branch 'ncollier/iomb-dev' of bitbucket.org:ncollier/ilamb into ncollier/iomb-dev 06859fc removed uneeded file 8d8c890 added oxygen to iomb a5a2b5a changed the colormaps for the confrontations in IOMB 231a9bc added a mass weighting for the bias in IOMB b95af80 added scores to iomb 199e292 added a model setup capability for shifting time in individual models 79c6223 updates to iomb to match current data availability da824d3 initial stab at climatologies 0ec794a working on reading in climatologies 562ddba merge of master 5331d2f added climatology reading capability facd362 renamed the land configure file and added an ocean file e5c8687 added some ignores abc4aac Merge branch 'ncollier/fix-cmip5' d0fc903 added a disable_logging option because running in parallel on Yellowstone/Geyser stalls out 2ac13f3 removed a try/except so the trace will get passed up to ilamb-run and get logged d77e803 additional error handling 1fa9303 improved exception handling and logging a978ae8 removed previous exception 72a8aac added exception around the staging of data so simulatoin runs without faults b182c2d intelligent bounds trimming was not so smart and causing no data to be returned 9525f09 added safety for if bounds are listed as attributes, but lacking the corresponding bounds variable a6d264e added scipy as a dependency due to interpolation d6fa265 bugfix for creating site names when no labels are provided. Thanks to Kang Wang for the report. a7bc3fd added conditional around the time taylor diagram of nbp 92a2706 neglected to add the script d5fd387 added a first stab at ilamb-doctor f32f225 changed file mode e30ecb0 fixes to multimodel mean ef69c04 added multimodel mean script 9baff23 incremental progress on iomb 2144ede fixing writing out dimensions 3799997 added capability to handle lat and lon in 2d fbbb4d7 improvements to match up with ilamb-fetch 8c57e67 Added ocean code 86185c4 fixed integrateInSpace when depths are present e8ae21c Merge branch 'master' into ncollier/iomb-dev e49cb39 rework netCDF dumps to avoid dependence on the spatial flag, allows for functions to be written which are a functino of only lat or lon d21d139 change reference clipping slightly to require a clip to be significant 41d1aa4 removed print statements, regression tests now pass 2fc1a7f added a check on longitude values, regional models must be sufficiently different that a global model b5fdb05 Merge branch 'ncollier/bugfix-depth' b06b0b8 changes to scores to reflect scoring changes 36eacd5 merge plot fixes a44aeae added code which captures the git hash and adds it to the html output 2dc04b3 added a provision for if all plots have a legend 0c1e53a extend the model legend figure 7947434 altered EvapFrac to mask out where not valid c979ecf evap fraction needs abs values, added custom conf, derived variable cannot currently handle functions 0855734 added a smoothed halo functionality to handle interpolation near coastlines 2eeb778 added default extents to the confrontation 94834eb fix legends in the all models page 9990744 removed legends from the allmodels page 03c06a9 reworked relationship output so benchmarks appear again 2e59863 added a difference score ae84cb2 added bilinear interpolation in upscaling of model results 2a5a802 added a missing exception, fixed score computation for datasites e86c732 conditionally skip cycle part of the analysis, fixed the score mapping thru the exponential 48644ad added sites to the analysis 95b5767 after a round of feedback on the analysis rewrite b6e7db9 expand space mean plots, change limits to be per region across all models 7bf09f5 added extents functionality to the Scoreboard which will trim models to the maximum shared coverage among all models ba62d4a added spatial extent computation for all models f1107a3 determining which interval can return two intervals if the location is on a cell boundary 20740b2 add reference trimming for RASM to work 0a8dac2 proposed fix to integration in depth dimension 1c3bf5b more rework of analysis ddc2e34 Merge branch 'ncollier/fix-nbp' of bitbucket.org:ncollier/ilamb into ncollier/fix-nbp c0ef21b initial stab at new analysis 28646ea correctly interpolate the area as well in Variable 91adbdb fixed a crash when no scalars are included in a file 183dd0b shift html images to wrap, labels now on top, some images broken eda2419 Merge branch 'ncollier/site-plots' into ncollier/fix-nbp c0c7d31 added some space to regional plot bounds on site data 7a8bae6 improved phase shift by adding an option to integrate the abolsute value of the integrand 10129a1 fix nbp distribution plots 66906a8 changes to nbp 9e477ea added grid lines to line plots fc9f030 extended the ylimits of spatially integrated plots a84d33d coarsening was happening beyond where models had data 4a107a6 fixed a problem when vals can be nans c028605 mostly functional site based implementation f31763e more work on getting the javascript to play well together 1681fb1 functional integration 9295914 initial site plots work b0ae92c restored region names to the select menus after revamping region treatment d4f0d3c sped up ilamb-fetch by only checking the contents of the downloaded sha1sum file 7f03e2c biomass score changed as we removed a dataset 25f6ea8 cosmetic reordering of a few datasets 4323f67 added the special confrontation for runoff 8c61193 Merge branch 'master' into ncollier/update-data 42ea0f6 Merge branch 'master' of bitbucket.org:ncollier/ilamb 6755f18 added a return of the regions added when defining using a netcdf file 4ca4501 missed an incorrectly defined unitless unit 1e7ce05 Merged in mdpiper/swap-latlon-units (pull request NCAR#5) 69ced08 Swap units on lat and lon variables bdadacd cosmetic fixing units on some scalars from invalid '-' to '1' 2de96d8 fixed a bug where coarsening datasites didn't return a Variable representing datasites c35bbb4 cannot use __getitem__ on masked constants 226a99f fix region pruning when nodata is present 60f69c8 added another dependency to OLCF installation instructions, thanks Min Xu c69e4b2 changed default limit type to the middle 98% e57a29a added region documentation 0f212c9 added region definition user API, now only GFED regions are included by default 9f7bd4e minor changes to scores after region redifinitions 442b36d fix ILAMB crashes due to new region implementations 72b96e0 initial rework of regions ae4a3c8 fixed relationship bins ater changing some limits 02c1add changed variables to reflect new data 27cdb79 fixed relationship bins ater changing some limits 5dbb8b9 Merge branch 'ncollier/regional-models' 8e021cc disabled spatial clipping of the reference as this was leading to errors in the scores da544ab added logging for when spatial data is removed 3dc016c improved spatial clipping in Variable 2d2b2ed also changed limit types for Precip and Latent heat for removing outliers causes plots to become washed out 46b8c68 fixed a data writing issue which was causing NBP to plot in strange ways a5e091b changed limit type of soil carbon to be more helpful 434ec49 added extent checks in MakeComparable to accomodate regional models 9e4580a Merged in mdpiper/update-ilamb-fetch (pull request NCAR#4) 80fe3c8 Use dirname and makedirs in BuildDirectories function 66f5ca7 Added a new installed script which will download data and check for data integrity ee8ca0a restructured model_year time shifts so they are correct for derived variables git-subtree-dir: ilamb/ilamb git-subtree-split: 218b6e284c06a8489b536faf5c8f9667a4c1d265
bertinia
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Oct 26, 2017
c425638 Update __init__.py e340d4c Update README bffb962 Update setup.py REVERT: 0f5eb0b Merge pull request NCAR#34 from NCAR/devel REVERT: 34747e1 Merge pull request NCAR#29 from NCAR/devel REVERT: fa67fce Merge pull request NCAR#26 from NCAR/devel REVERT: 4ac6f44 Merge pull request NCAR#24 from NCAR/devel REVERT: 3fc272d Merge pull request NCAR#22 from NCAR/devel REVERT: 108739b Merge pull request NCAR#20 from NCAR/devel REVERT: 490ba39 Merge pull request NCAR#18 from NCAR/devel REVERT: d34c46e Merge pull request NCAR#15 from NCAR/devel REVERT: d2290b6 Merge pull request NCAR#9 from NCAR/devel REVERT: 2436413 Merge pull request NCAR#6 from NCAR-CISL-ASAP/devel REVERT: 2125a4f Merge pull request NCAR#4 from NCAR-CISL-ASAP/devel REVERT: c51daf1 Merge pull request NCAR#1 from NCAR-CISL-ASAP/devel git-subtree-dir: averager/pyAverager git-subtree-split: c425638e984b30ba743dd0dbcb30ff7de071b240
bertinia
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Feb 15, 2018
018f31f Merge pull request NCAR#44 from NCAR/devel f28eccb Merge pull request NCAR#43 from NCAR/char_bug 6fbc661 Bump verison number 92a2b8c Merge pull request NCAR#42 from NCAR/char_bug e67cc3a Update to the previous fix: 37afc58 Merge pull request NCAR#41 from NCAR/char_bug e4b2715 Fix bug with character identification. The code was only checking for 'S1'. Compressed netcdf4 files identify characters as 'S3'. e3f121e Merge pull request NCAR#40 from NCAR/devel 28f36ec Merge pull request NCAR#38 from NCAR/devel 3563c85 Merge pull request NCAR#35 from NCAR/devel 0f5eb0b Merge pull request NCAR#34 from NCAR/devel 34747e1 Merge pull request NCAR#29 from NCAR/devel fa67fce Merge pull request NCAR#26 from NCAR/devel 4ac6f44 Merge pull request NCAR#24 from NCAR/devel 3fc272d Merge pull request NCAR#22 from NCAR/devel 108739b Merge pull request NCAR#20 from NCAR/devel 490ba39 Merge pull request NCAR#18 from NCAR/devel d34c46e Merge pull request NCAR#15 from NCAR/devel d2290b6 Merge pull request NCAR#9 from NCAR/devel 2436413 Merge pull request NCAR#6 from NCAR-CISL-ASAP/devel 2125a4f Merge pull request NCAR#4 from NCAR-CISL-ASAP/devel c51daf1 Merge pull request NCAR#1 from NCAR-CISL-ASAP/devel git-subtree-dir: averager/pyAverager git-subtree-split: 018f31ff4013fa0b240470003f27025811aeaf11
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