Release/v2.0.0

[gerardhros]

Added

• Add ppr_bouwplan_tables.R in dev/scripts
• Add merge_nema_tables.R in dev/scripts
• Add ppr_crops_crumbleability.R in dev/scripts
• Add arguments B_GWL_GHG, B_GWL_GLG and B_Z_TWO to obic_field and obic_field_dt
• Activate calc_workability
• Add calc_makkink to add makkink factors to crop table
• Add calc_psp to estimate precipitation surplus
• Add ind_nematodes and ind_nematodes_list to estimate the index for nematode risks
• Add ind_gw_recharge to estimate the groundwater recharge index
• Add calc_n_efficiency and ind_n_efficiency to estimate N efficiency
• Add calc_pesticide_leaching and ind_pesticide_leaching to evaluate retention of pesticides in topsoil
• Add check to ppr_weight_obic to check if all indicators in weight.obic occur in column_descriptions_obic
• Add vignette obic_workability, describing how workability is calculated and affected by its input variables
• Add vignette obic_introduction as a short tutorial describing the OBIC principles
• Add vignette obic_score_aggregation to illustrate the aggregation principles used
• Add table weather.obic with monthly mean precipitation, temperature and evaporation
• Add table crops.makkink with mean Makkink factors per crop type
• Add table nema.crop.rot.obic added with crop sensitivity for nematodes
• Add table nema.obic with treshold values per species
• Add GitHub Action to run R-CMD-Check for changes on master and development
• Add coverage of unit tests

Changed

• Update documentation for workability
• Update weight.obic for workability
• Update column_descriptions_obic.Rdata
• Update documentation for nematodes
• Update calc_workability
• Rename B_Z_TWO to B_GWL_ZCRIT
• Improve function description of ind_workability
• Increase required days post GLG for maize on sand or loess to match October 1
• Increase required days post GLG for maize on other soils to match October 20
• season.obic can now be merged on both landuse and soiltype
• Update binnenveld with BodemSchat data (via OBIC-helpers)
• obic_field can be used for multiple fields with field-ID

Removed

• Removes A_COM_FR and A_CACO3_IF from input as they were not used Redundant parameters required by obic_field #145

Fixed

• Error in grass_age: age was incorrectly estimated for multiple fields
• Removed negative values from season.obic
• Ensured total_days >= req_days_pre_glg + req_days_post_glg in season.obic
• Root depth was incorrectly assigned for maize and nature
• Fix the format of NEWS.md so that it is shown on the package website
• Remove the prefixes and suffixed of B_GWL_CLASS