Pangenome

Pangenome and variation graph

Communication

Josiah: After some debate, I decided to create a second project for a Pangenome Browser. This depends on Variation graph construction, but it's certainly a different set of tasks that can be carried out independently. In order for a browser to be effective, we must have annotations aggregated/curated as a third task. I would still like us to coordinate closely.

Participants

• Erik Garrison
• Michael Heuer
• Pjotr Prins
• Josiah Seaman (Graph Genome Browser Consortium)
• Christian Fischer
• Rutger Vos (maybe, especially if using PanTools)
• Ben W. (maybe)
• Simon Heumos
• Noah Legall (maybe, I am interested in learning on what biological questions pangenomics can answer for viruses. Would be a night time endeavor for me)
• Ali Ghaffaari (maybe)
• Fawaz Dabbaghie (maybe)
• Hao Chen
• Jouni Sirén
• Simone Ciccolella
• Luca Denti
• Glenn Hickey
• Saeed Omidi (maybe)
• René Xavier
• Knut Rand
• Andrea Guarracino
• Flavia Villani