Code

Workflows without poetry#71

Code

Merged

gregordecristoforo merged 143 commits intomainuit-cosmo/blobmodel:mainfrom add_testsuit-cosmo/blobmodel:add_testsCopy head branch name to clipboardJul 21, 2023

+1,635-1,038

Commits

Commits on Jun 19, 2023

• rename pulse_shape to blob_shape

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Commits on Jun 20, 2023

• rename pulse_shape to blob_shape in all files

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• first html doc generated from doctrings

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Commits on Jun 26, 2023

• structure of docs defined

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• gifs added to docs

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• add rst files for all chapters

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• renaming API references

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Commits on Jul 3, 2023

• logo introduced

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• add logo to index.rst

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• run black on files

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• first page of docs done

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• install section finished

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Commits on Jul 4, 2023

• getting started section finished

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• replace save parameter with gif_name

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• adjust examples

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• visualizing model section done

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Commits on Jul 5, 2023

• model geometry implemented

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• model shapes implemented

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• distribution section done

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• added figures to blob labels section

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• gif for alignment added

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• blob labels implementedwq

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• add axes labels to pulse shape figures

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• drainage time section done

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• blob alignment section done

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Commits on Jul 6, 2023

• install dev option done

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• workflow added to contribution guide

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• style guide added

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• testing guide written

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• fix typos

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• add .readthedocs.yml

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• add docs badge to Readme

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• fix type hints in docs

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• try to fix type hint in create logo

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• try to fix type hint in create log again

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• run black on create_logo.py

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• add mypy to docs

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• add test for one dim warning

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• add tests for model.py

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• add tests for abstract class

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Commits on Jul 7, 2023

• add tests to all pulse shapes

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• remove unused function calls

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• cahnge codecov specification

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• fix yml file error

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• use latest python version

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• use pytest-cov instead of poetry

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• install pytest-cov

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Commits on Jul 10, 2023

• create new pyproject.toml

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• add dependencies to pyproject.toml

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• run never version of black

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• add python version to pyproject.toml

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• fix mypy issues

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• run black without poetry

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• mypy and pytest without poetry

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• fix pytest install

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• fix pytest install

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• add upload of coverage report

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• check codecoverage

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• add checks for python 3.10

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• add missing ticks

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• fix type hints in geometry.py

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• fix type hints in model.py

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• fix type hints in model.py

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• fix type hints in model.py

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• fix type hints in blob.py

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• fix type hints in stochasticality

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• fix type hints in stochasticality

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• fix type hints in stochasticality

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• fix type hints in stochasticality

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• fix type hints in stochasticality

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Commits on Jul 11, 2023

• fix dict naming in stochasticality

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• fix typehints in blobs.py

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Commits on Jul 12, 2023

• remove unused files

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• upload code coverage report

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• try to fix codecoverage.xml upload

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  34f71aa

• test different python setup

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• test new branch

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• reverse previous commits

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• use nver version for actions

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• use latest version for actions

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• try default as code report format

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• dummy line added

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• dummy line deleted

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• update codecov output file

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• uncomment details

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• specify python version 3.11

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• remove verbose from codecov

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Commits on Jul 13, 2023

• use coverage instead of pytest --cov

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• coverage badge added

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• update badges

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• add logo to readme

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• Update README.md

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• Update install instructions

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• put animations next to each other

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• Remove unneeded lines

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• Update description of model

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• added contribution section

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• fix spelling mistake in code example

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• square example gif

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• Update README.md

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Commits on Jul 14, 2023

• example gif doesn't start with empty domain

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• Merge branch 'add_tests' of github.com:uit-cosmo/2d_propagating_blobs into add_tests

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• add batches to readme

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• add logo to badge

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• remove logo to badge

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• test older python versions

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• only allow 3.10 and never

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• Merge branch 'add_tests' into simplify_show_model

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• fix black issues

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• Merge pull request #68 from uit-cosmo/simplify_show_model

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• resolve conflicts

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• update tests

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• run black on create_logo.py

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• Merge pull request #70 from uit-cosmo/docs

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• add autodoc_mock_imports

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• run black on conf.py

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• add sphinx to dependencies

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• add napoleon

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• mock xarray and add png files in docs

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• mock blobmodel

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• use magicmock for blobmodel

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• import blobmodel

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• reverse last commit

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Commits on Jul 18, 2023

• add blobmodel import

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• add relative import to install docs on readthedocs

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• add requirements.txt

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• try set path

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• remove direct import

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• try without mocking

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• try without mocking

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• reverse previous changes

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• use simplified requirements.txt

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• use old requirements.txt

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• specify build in .readthedocs.yml

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• remove unneeded imports in conf.py

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• delete commented out lines

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• increase logo size

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Commits on Jul 20, 2023

• swap 1d with 2d

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Commits on Jul 21, 2023

• add check for number of blobs

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• Merge branch 'add_tests' of github.com:uit-cosmo/2d_propagating_blobs into add_tests

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• add example for 2-sided exp blob shape

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• add 2-sided exp to documentation

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• increase version to 1.0.0

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