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[c++, python] `fastercsx`: improved duplicate coordinate handling #5810

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Job	Run time
build (macos-latest, 3.12) / build	13m 13s
build (macos-latest, 3.12) / lint	36s
build (macos-latest, 3.9) / build	11m 7s
build (macos-latest, 3.9) / lint	0s
build (ubuntu-24.04, 3.12) / build	14m 43s
build (ubuntu-24.04, 3.12) / lint	36s
build (ubuntu-24.04, 3.9) / build	14m 19s
build (ubuntu-24.04, 3.9) / lint	0s
	54m 34s