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@rikenbit

RIKEN BiT

Laboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research

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  1. scTensor scTensor Public

    R package for detection of cell-cell interaction using Non-negative Tensor Decomposition

    R 34 6

  2. OnlinePCA.jl OnlinePCA.jl Public

    Online Principal Component Analysis

    Julia 22 2

  3. nnTensor nnTensor Public

    R package for Non-negative Tensor Decomposition

    R 16 5

  4. ramdaq ramdaq Public

    Nextflow 13 3

  5. CCIPCA CCIPCA Public

    Candit Covariance-free Incremental Principle Component Analysis (CCIPCA)

    R 6 2

  6. onlinePCA-experiments onlinePCA-experiments Public

    Shell 6

Repositories

Showing 10 of 82 repositories
  • GenPerturb Public

    This repository hosts the code and tools developed for benchmarking transfer learning in genomic DNA models.

    rikenbit/GenPerturb’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 22, 2024
  • self_incomp Public

    sakigake self-incomp

    rikenbit/self_incomp’s past year of commit activity
    R 1 0 0 0 Updated Oct 13, 2024
  • mesh-workflow Public
    rikenbit/mesh-workflow’s past year of commit activity
    Python 0 1 0 0 Updated Sep 25, 2024
  • pubmed-workflow Public
    rikenbit/pubmed-workflow’s past year of commit activity
    Python 0 1 0 0 Updated Sep 25, 2024
  • lrbase-workflow Public

    Selection procedure of species used in LRBase.XXX.eg.db

    rikenbit/lrbase-workflow’s past year of commit activity
    R 2 1 0 0 Updated Sep 25, 2024
  • AHPubMedDbs Public
    rikenbit/AHPubMedDbs’s past year of commit activity
    R 1 1 0 0 Updated Sep 25, 2024
  • AHLRBaseDbs Public

    Supplies AnnotationHub with LRbaseDb Ligand-Receptor annotation databases for many species.

    rikenbit/AHLRBaseDbs’s past year of commit activity
    R 0 1 0 0 Updated Sep 25, 2024
  • AHMeSHDbs Public

    Supplies AnnotationHub with MeSHDb NIH MeSH annotation databases for many species.

    rikenbit/AHMeSHDbs’s past year of commit activity
    R 0 1 0 0 Updated Sep 25, 2024
  • DelayedTensor Public

    R package for sparse and out-of-core arithmetic and decomposition of Tensor

    rikenbit/DelayedTensor’s past year of commit activity
    R 4 0 0 0 Updated Sep 23, 2024
  • SparseArray-experiments Public

    Benchmark of some sparse array formats

    rikenbit/SparseArray-experiments’s past year of commit activity
    R 0 MIT 0 0 0 Updated Sep 22, 2024
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