[REVIEW] Fix issues with building cudf in a non-conda environment

CONTRIBUTING.md

@@ -320,7 +320,7 @@ flag. Below is a list of the available arguments and their purpose:
 | `PYARROW_VERSION` | 1.0.1 | Not supported | set pyarrow version |
 | `CMAKE_VERSION` | newest | >=3.14 | set cmake version |
 | `CYTHON_VERSION` | 0.29 | Not supported | set Cython version |
-| `PYTHON_VERSION` | 3.6 | 3.7 | set python version |
+| `PYTHON_VERSION` | 3.7 | 3.8 | set python version |
 
 ---
 

conda/environments/cudf_dev_cuda10.1.yml

@@ -14,7 +14,7 @@ dependencies:
   - rmm=0.19.*
   - cmake>=3.14
   - cmake_setuptools>=0.1.3
-  - python>=3.6,<3.8
+  - python>=3.7,<3.9
   - numba>=0.49.0,!=0.51.0
   - numpy
   - pandas>=1.0,<1.3.0dev0
@@ -36,7 +36,6 @@ dependencies:
   - pandoc=<2.0.0
   - cudatoolkit=10.1
   - pip
-  - partd
   - flake8=3.8.3
   - black=19.10
   - isort=5.0.7

conda/environments/cudf_dev_cuda10.2.yml

@@ -14,7 +14,7 @@ dependencies:
   - rmm=0.19.*
   - cmake>=3.14
   - cmake_setuptools>=0.1.3
-  - python>=3.6,<3.8
+  - python>=3.7,<3.9
   - numba>=0.49,!=0.51.0
   - numpy
   - pandas>=1.0,<1.3.0dev0
@@ -36,7 +36,6 @@ dependencies:
   - pandoc=<2.0.0
   - cudatoolkit=10.2
   - pip
-  - partd
   - flake8=3.8.3
   - black=19.10
   - isort=5.0.7

conda/environments/cudf_dev_cuda11.0.yml

@@ -14,7 +14,7 @@ dependencies:
   - rmm=0.19.*
   - cmake>=3.14
   - cmake_setuptools>=0.1.3
-  - python>=3.6,<3.8
+  - python>=3.7,<3.9
   - numba>=0.49,!=0.51.0
   - numpy
   - pandas>=1.0,<1.3.0dev0
@@ -36,7 +36,6 @@ dependencies:
   - pandoc=<2.0.0
   - cudatoolkit=11.0
   - pip
-  - partd
   - flake8=3.8.3
   - black=19.10
   - isort=5.0.7

conda/environments/cudf_dev_cuda11.1.yml

@@ -0,0 +1,67 @@
+# Copyright (c) 2021, NVIDIA CORPORATION.
+
+name: cudf_dev
+channels:
+  - rapidsai
+  - nvidia
+  - rapidsai-nightly
+  - conda-forge
+  - defaults
+dependencies:
+  - clang=8.0.1
+  - clang-tools=8.0.1
+  - cupy>7.1.0,<9.0.0a0
+  - rmm=0.19.*
+  - cmake>=3.14
+  - cmake_setuptools>=0.1.3
+  - python>=3.7,<3.9
+  - numba>=0.49,!=0.51.0
+  - numpy
+  - pandas>=1.0,<1.3.0dev0
+  - pyarrow=1.0.1
+  - fastavro>=0.22.9
+  - notebook>=0.5.0
+  - cython>=0.29,<0.30
+  - fsspec>=0.6.0
+  - pytest
+  - pytest-benchmark
+  - pytest-xdist
+  - sphinx
+  - sphinx_rtd_theme
+  - sphinxcontrib-websupport
+  - nbsphinx
+  - numpydoc
+  - ipython
+  - recommonmark
+  - pandoc=<2.0.0
+  - cudatoolkit=11.1
+  - pip
+  - flake8=3.8.3
+  - black=19.10
+  - isort=5.0.7
+  - mypy=0.782
+  - typing_extensions
+  - pre_commit
+  - dask>=2021.3.1
+  - distributed>=2.22.0
+  - streamz
+  - dlpack
+  - arrow-cpp=1.0.1
+  - arrow-cpp-proc * cuda
+  - boost-cpp>=1.72.0
+  - double-conversion
+  - rapidjson
+  - flatbuffers
+  - hypothesis
+  - sphinx-markdown-tables
+  - sphinx-copybutton
+  - mimesis
+  - packaging
+  - protobuf
+  - nvtx>=0.2.1
+  - cachetools
+  - pip:
+      - git+https://github.com/dask/dask.git@main
+      - git+https://github.com/dask/distributed.git@main
+      - git+https://github.com/python-streamz/streamz.git
+      - pyorc

conda/environments/cudf_dev_cuda11.2.yml

@@ -0,0 +1,67 @@
+# Copyright (c) 2021, NVIDIA CORPORATION.
+
+name: cudf_dev
+channels:
+  - rapidsai
+  - nvidia
+  - rapidsai-nightly
+  - conda-forge
+  - defaults
+dependencies:
+  - clang=8.0.1
+  - clang-tools=8.0.1
+  - cupy>7.1.0,<9.0.0a0
+  - rmm=0.19.*
+  - cmake>=3.14
+  - cmake_setuptools>=0.1.3
+  - python>=3.7,<3.9
+  - numba>=0.49,!=0.51.0
+  - numpy
+  - pandas>=1.0,<1.3.0dev0
+  - pyarrow=1.0.1
+  - fastavro>=0.22.9
+  - notebook>=0.5.0
+  - cython>=0.29,<0.30
+  - fsspec>=0.6.0
+  - pytest
+  - pytest-benchmark
+  - pytest-xdist
+  - sphinx
+  - sphinx_rtd_theme
+  - sphinxcontrib-websupport
+  - nbsphinx
+  - numpydoc
+  - ipython
+  - recommonmark
+  - pandoc=<2.0.0
+  - cudatoolkit=11.2
+  - pip
+  - flake8=3.8.3
+  - black=19.10
+  - isort=5.0.7
+  - mypy=0.782
+  - typing_extensions
+  - pre_commit
+  - dask>=2021.3.1
+  - distributed>=2.22.0
+  - streamz
+  - dlpack
+  - arrow-cpp=1.0.1
+  - arrow-cpp-proc * cuda
+  - boost-cpp>=1.72.0
+  - double-conversion
+  - rapidjson
+  - flatbuffers
+  - hypothesis
+  - sphinx-markdown-tables
+  - sphinx-copybutton
+  - mimesis
+  - packaging
+  - protobuf
+  - nvtx>=0.2.1
+  - cachetools
+  - pip:
+      - git+https://github.com/dask/dask.git@main
+      - git+https://github.com/dask/distributed.git@main
+      - git+https://github.com/python-streamz/streamz.git
+      - pyorc

cpp/cmake/Modules/StringifyJITHeaders.cmake

@@ -34,6 +34,7 @@ add_custom_command(WORKING_DIRECTORY ${CUDF_SOURCE_DIR}/include
                           ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/timestamps.hpp.jit
                           ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/fixed_point.hpp.jit
                           ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/durations.hpp.jit
+                          ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/assert.cuh.jit
                           ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/chrono.jit
                           ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/climits.jit
                           ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/cstddef.jit
@@ -65,6 +66,7 @@ add_custom_command(WORKING_DIRECTORY ${CUDF_SOURCE_DIR}/include
                                    ${CUDF_SOURCE_DIR}/include/cudf/wrappers/timestamps.hpp
                                    ${CUDF_SOURCE_DIR}/include/cudf/fixed_point/fixed_point.hpp
                                    ${CUDF_SOURCE_DIR}/include/cudf/wrappers/durations.hpp
+                                   ${CUDF_SOURCE_DIR}/include/cudf/detail/utilities/assert.cuh
                                    ${LIBCUDACXX_INCLUDE_DIR}/cuda/std/chrono
                                    ${LIBCUDACXX_INCLUDE_DIR}/cuda/std/climits
                                    ${LIBCUDACXX_INCLUDE_DIR}/cuda/std/cstddef
@@ -99,6 +101,7 @@ add_custom_command(WORKING_DIRECTORY ${CUDF_SOURCE_DIR}/include
                    COMMAND ${CUDF_BINARY_DIR}/stringify cudf/wrappers/timestamps.hpp > ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/timestamps.hpp.jit
                    COMMAND ${CUDF_BINARY_DIR}/stringify cudf/fixed_point/fixed_point.hpp > ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/fixed_point.hpp.jit
                    COMMAND ${CUDF_BINARY_DIR}/stringify cudf/wrappers/durations.hpp > ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/durations.hpp.jit
+                   COMMAND ${CUDF_BINARY_DIR}/stringify cudf/detail/utilities/assert.cuh > ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/assert.cuh.jit
                    COMMAND ${CUDF_BINARY_DIR}/stringify ${LIBCUDACXX_INCLUDE_DIR}/cuda/std/chrono cuda_std_chrono > ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/chrono.jit
                    COMMAND ${CUDF_BINARY_DIR}/stringify ${LIBCUDACXX_INCLUDE_DIR}/cuda/std/climits cuda_std_climits > ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/climits.jit
                    COMMAND ${CUDF_BINARY_DIR}/stringify ${LIBCUDACXX_INCLUDE_DIR}/cuda/std/cstddef cuda_std_cstddef > ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/cstddef.jit
@@ -133,6 +136,7 @@ add_custom_target(stringify_run DEPENDS
                   ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/timestamps.hpp.jit
                   ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/fixed_point.hpp.jit
                   ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/durations.hpp.jit
+                  ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/assert.cuh.jit
                   ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/chrono.jit
                   ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/climits.jit
                   ${CUDF_GENERATED_INCLUDE_DIR}/include/jit/libcudacxx/cuda/std/cstddef.jit

cpp/src/binaryop/binaryop.cpp

@@ -25,6 +25,7 @@
 #include <jit/parser.h>
 #include <jit/type.h>
 
+#include <jit/assert.cuh.jit>
 #include <jit/bit.hpp.jit>
 #include <jit/common_headers.hpp>
 #include <jit/durations.hpp.jit>
@@ -86,7 +87,8 @@ const std::vector<std::string> header_names{"operation.h",
                                             cudf_utilities_bit_hpp,
                                             cudf_wrappers_timestamps_hpp,
                                             cudf_wrappers_durations_hpp,
-                                            cudf_fixed_point_fixed_point_hpp};
+                                            cudf_fixed_point_fixed_point_hpp,
+                                            cudf_detail_utilities_assert_cuh};
 
 std::istream* headers_code(std::string filename, std::iostream& stream)
 {

docker_build/Dockerfile

@@ -0,0 +1,80 @@
+# Copyright (c) 2021, NVIDIA CORPORATION.
+
+ARG CUDA_VERSION=11.2.2
+FROM nvidia/cuda:${CUDA_VERSION}-devel
+ENV CUDA_SHORT_VERSION=11.2
+
+SHELL ["/bin/bash", "-c"]
+ENV LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/cuda/lib64:/usr/local/cuda/extras/CUPTI/lib64:/usr/local/lib:/repos/dist/lib
+
+ENV DEBIAN_FRONTEND=noninteractive
+
+ENV CUDA_HOME=/usr/local/cuda
+ENV CUDA_PATH=$CUDA_HOME
+ENV PATH=${CUDA_HOME}/lib64/:${PATH}:${CUDA_HOME}/bin
+
+# Build env variables for arrow
+ENV CMAKE_BUILD_TYPE=release
+ENV PYARROW_WITH_PARQUET=1
+ENV PYARROW_WITH_CUDA=1
+ENV PYARROW_WITH_ORC=1
+ENV PYARROW_WITH_DATASET=1
+
+ENV ARROW_HOME=/repos/dist
+
+# Build env variables for rmm
+ENV INSTALL_PREFIX=/usr
+
+
+RUN apt update -y --fix-missing && \
+    apt upgrade -y && \
+      apt install -y --no-install-recommends software-properties-common && \
+      add-apt-repository ppa:deadsnakes/ppa && \
+      apt update -y --fix-missing
+
+RUN apt install -y --no-install-recommends \
+      git \
+      libboost-all-dev \
+      python3.8-dev \
+      build-essential \
+      autoconf \
+      bison \
+      flex \
+      libboost-filesystem-dev \
+      libboost-system-dev \
+      libboost-regex-dev \
+      libjemalloc-dev \
+      wget \
+      libssl-dev \
+      protobuf-compiler && \
+    apt-get autoremove -y && \
+    apt-get clean && \
+    rm -rf /var/lib/apt/lists/* && \
+    update-alternatives --install /usr/bin/python python /usr/bin/python3.8 1 && \
+    wget https://bootstrap.pypa.io/get-pip.py && \
+    python get-pip.py
+
+# Install cmake
+RUN version=3.18 && build=5 && mkdir ~/temp && cd ~/temp && wget https://cmake.org/files/v$version/cmake-$version.$build.tar.gz && \
+    tar -xzvf cmake-$version.$build.tar.gz && cd cmake-$version.$build/ && ./bootstrap && make -j$(nproc) && make install
+
+# Install arrow from source
+RUN git clone https://github.com/apache/arrow.git /repos/arrow && mkdir /repos/dist/ && cd /repos/arrow && git checkout apache-arrow-1.0.1 && git submodule init && \
+    git submodule update && export PARQUET_TEST_DATA="${PWD}/cpp/submodules/parquet-testing/data" && export ARROW_TEST_DATA="${PWD}/testing/data" && \
+    cd /repos/arrow/cpp && mkdir release && cd /repos/arrow/cpp/release && pip install -r /repos/arrow/python/requirements-build.txt && \
+    cmake -DCMAKE_INSTALL_PREFIX=$ARROW_HOME -DCMAKE_INSTALL_LIBDIR=lib -DARROW_FLIGHT=ON -DARROW_GANDIVA=OFF -DARROW_ORC=ON -DARROW_WITH_BZ2=ON -DARROW_WITH_ZLIB=ON -DARROW_WITH_ZSTD=ON -DARROW_WITH_LZ4=ON -DARROW_WITH_SNAPPY=ON -DARROW_WITH_BROTLI=ON -DARROW_PARQUET=ON -DARROW_PYTHON=ON -DARROW_PLASMA=ON -DARROW_BUILD_TESTS=ON -DARROW_CUDA=ON -DARROW_DATASET=ON .. && \
+    make -j$(nproc) && make install && cd /repos/arrow/python/ && python setup.py build_ext --build-type=release bdist_wheel && pip install /repos/arrow/python/dist/*.whl
+
+
+# Install rmm from source
+RUN cd /repos/ && git clone https://github.com/rapidsai/rmm.git && cd /repos/rmm/ && ./build.sh librmm && pip install /repos/rmm/python/.
+
+ADD . /repos/cudf/
+
+# Build env for CUDF build
+ENV CUDF_ROOT=/repos/cudf/cpp/build/
+
+# Install cudf from source
+RUN cd /repos/cudf/ && git submodule update --init --recursive && ./build.sh libcudf && \
+    pip install /repos/cudf/python/cudf/.
+

python/cudf/pyproject.toml

@@ -0,0 +1,29 @@
+# Copyright (c) 2021, NVIDIA CORPORATION.
+
+[build-system]
+
+requires = [
+    "wheel",
+    "setuptools",
+    "cython>=0.29,<0.30",
+]
+
+[tool.black]
+line-length = 79
+target-version = ["py36"]
+include = '\.py?$'
+exclude = '''
+/(
+    thirdparty |
+    \.eggs |
+    \.git |
+    \.hg |
+    \.mypy_cache |
+    \.tox |
+    \.venv |
+    _build |
+    buck-out |
+    build |
+    dist
+)/
+'''

python/cudf/requirements/cuda-10.1/dev_requirements.txt

@@ -0,0 +1,41 @@
+# Copyright (c) 2021, NVIDIA CORPORATION.
+
+# pyarrow gpu package will have to be built from source :
+# https://arrow.apache.org/docs/python/install.html#installing-from-source
+
+cupy-cuda101
+cachetools
+cmake
+cmake-setuptools>=0.1.3
+cython>=0.29,<0.30
+dlpack
+fastavro>=0.22.9
+flatbuffers
+fsspec>=0.6.0
+hypothesis
+mimesis
+mypy==0.782
+nbsphinx
+numba>=0.49.0,!=0.51.0
+numpy
+numpydoc
+nvtx>=0.2.1
+packaging
+pandas>=1.0,<1.3.0dev0
+pandoc==2.0a4
+protobuf
+pyorc
+pytest
+pytest-benchmark
+pytest-xdist
+rapidjson
+recommonmark
+setuptools
+sphinx
+sphinx-copybutton
+sphinx-markdown-tables
+sphinx_rtd_theme
+sphinxcontrib-websupport
+typing_extensions
+typing_extensions
+wheel