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[BUG] Unable to assign null/nan in categorical column #7446

Closed
galipremsagar opened this issue Feb 25, 2021 · 4 comments · Fixed by #7375
Closed

[BUG] Unable to assign null/nan in categorical column #7446

galipremsagar opened this issue Feb 25, 2021 · 4 comments · Fixed by #7375
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bug Something isn't working Python Affects Python cuDF API.

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@galipremsagar
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Describe the bug
We can have null values in a categorical column and a user can any time set values at an index to <NA> or even np.nan. We are currently not able to do so.

Steps/Code to reproduce bug

>>> import numpy as np
>>> import cudf
>>> s = cudf.Series([1.1, 2.3], dtype='category')
>>> s
0    1.1
1    2.3
dtype: category
Categories (2, float64): [1.1, 2.3]
>>> g = s.to_pandas()
>>> g
0    1.1
1    2.3
dtype: category
Categories (2, float64): [1.1, 2.3]
>>> g[1] = 5
>>> g[1] = None
>>> g
0    1.1
1    NaN
dtype: category
Categories (2, float64): [1.1, 2.3]
>>> s[2] = None
Traceback (most recent call last):
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/indexing.py", line 156, in _loc_to_iloc
    arg, closest=False
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/column/numerical.py", line 530, in find_first_value
    raise ValueError("value not found")
ValueError: value not found

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/series.py", line 894, in __setitem__
    self.loc[key] = value
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/indexing.py", line 143, in __setitem__
    key = self._loc_to_iloc(key)
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/indexing.py", line 160, in _loc_to_iloc
    raise KeyError("label scalar is out of bound")
KeyError: 'label scalar is out of bound'

>>> import pandas as pd
>>> g[1] = pd.NA
>>> g
0    1.1
1    NaN
dtype: category
Categories (2, float64): [1.1, 2.3]
>>> s[1] = cudf.NA
Traceback (most recent call last):
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/column/column.py", line 1997, in as_column
    memoryview(arbitrary), dtype=dtype, nan_as_null=nan_as_null
TypeError: memoryview: a bytes-like object is required, not '_NAType'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/column/column.py", line 2034, in as_column
    else nan_as_null,
  File "pyarrow/array.pxi", line 269, in pyarrow.lib.array
  File "pyarrow/array.pxi", line 38, in pyarrow.lib._sequence_to_array
TypeError: '_NAType' object is not iterable

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/column/column.py", line 2066, in _construct_array
    arbitrary = cupy.asarray(arbitrary, dtype=dtype)
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cupy/_creation/from_data.py", line 66, in asarray
    return core.array(a, dtype, False, order)
  File "cupy/core/core.pyx", line 2011, in cupy.core.core.array
  File "cupy/core/core.pyx", line 2090, in cupy.core.core.array
  File "cupy/core/core.pyx", line 2162, in cupy.core.core._send_object_to_gpu
ValueError: Unsupported dtype object

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/series.py", line 894, in __setitem__
    self.loc[key] = value
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/indexing.py", line 147, in __setitem__
    self._sr.iloc[key] = value
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/indexing.py", line 96, in __setitem__
    value = column.as_column(value)
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/column/column.py", line 2051, in as_column
    _construct_array(arbitrary, dtype),
  File "/nvme/0/pgali/envs/cudfdev/lib/python3.7/site-packages/cudf/core/column/column.py", line 2069, in _construct_array
    if dtype is None and pd.api.types.infer_dtype(arbitrary) in (
  File "pandas/_libs/lib.pyx", line 1362, in pandas._libs.lib.infer_dtype
TypeError: '_NAType' object is not iterable

Expected behavior
We should be set values to <NA> / np.nan(but that won't add new categories, potentially would remove some).

Environment overview (please complete the following information)

  • Environment location: [Bare-metal]
  • Method of cuDF install: [from source]

Environment details
Please run and paste the output of the cudf/print_env.sh script here, to gather any other relevant environment details

Click here to see environment details
 **git***
 commit 3c8b83197427e8a946d0da462ce1dcfed612956f (HEAD -> branch-0.19, upstream/branch-0.19)
 Author: Jason Lowe <[email protected]>
 Date:   Wed Feb 24 13:49:25 2021 -0600
 
 Update JNI build to use CMAKE_CUDA_ARCHITECTURES (#7425)
 
 This eliminates the `Policy CMP0104 is not set` warning during the JNI build by using `CMAKE_CUDA_ARCHITECTURES` to specify the targeted CUDA architectures during the build.  This eliminates a lot of code replicated from the cpp build and reuses the `ConfigureCUDA` module added in #7391.  The architectures being used by the build are visible in the `mvn` output, e.g.:
 ```
 [exec] -- CUDF: Building CUDF for GPU architectures: 60-real;70-real;75
 ```
 
 This also configures the CPU compiler to use the same flags as the cpp build which required fixing a number of warnings (e.g.: sign mismatch comparisons, unused variables, etc.) in the JNI code since warnings are errors in the build.
 
 Authors:
 - Jason Lowe (@jlowe)
 
 Approvers:
 - Robert (Bobby) Evans (@revans2)
 - Alessandro Bellina (@abellina)
 - MithunR (@mythrocks)
 
 URL: https://github.com/rapidsai/cudf/pull/7425
 **git submodules***
 
 ***OS Information***
 DISTRIB_ID=Ubuntu
 DISTRIB_RELEASE=18.04
 DISTRIB_CODENAME=bionic
 DISTRIB_DESCRIPTION="Ubuntu 18.04.4 LTS"
 NAME="Ubuntu"
 VERSION="18.04.4 LTS (Bionic Beaver)"
 ID=ubuntu
 ID_LIKE=debian
 PRETTY_NAME="Ubuntu 18.04.4 LTS"
 VERSION_ID="18.04"
 HOME_URL="https://www.ubuntu.com/"
 SUPPORT_URL="https://help.ubuntu.com/"
 BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/"
 PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy"
 VERSION_CODENAME=bionic
 UBUNTU_CODENAME=bionic
 Linux dt07 4.15.0-76-generic #86-Ubuntu SMP Fri Jan 17 17:24:28 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux
 
 ***GPU Information***
 Wed Feb 24 17:21:04 2021
 +-----------------------------------------------------------------------------+
 | NVIDIA-SMI 440.64.00    Driver Version: 440.64.00    CUDA Version: 10.2     |
 |-------------------------------+----------------------+----------------------+
 | GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
 | Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
 |===============================+======================+======================|
 |   0  Tesla T4            On   | 00000000:3B:00.0 Off |                    0 |
 | N/A   48C    P8    16W /  70W |      0MiB / 15109MiB |      0%      Default |
 +-------------------------------+----------------------+----------------------+
 |   1  Tesla T4            On   | 00000000:5E:00.0 Off |                    0 |
 | N/A   37C    P8     9W /  70W |      0MiB / 15109MiB |      0%      Default |
 +-------------------------------+----------------------+----------------------+
 |   2  Tesla T4            On   | 00000000:AF:00.0 Off |                    0 |
 | N/A   32C    P8     9W /  70W |      0MiB / 15109MiB |      0%      Default |
 +-------------------------------+----------------------+----------------------+
 |   3  Tesla T4            On   | 00000000:D8:00.0 Off |                    0 |
 | N/A   31C    P8     9W /  70W |      0MiB / 15109MiB |      0%      Default |
 +-------------------------------+----------------------+----------------------+
 
 +-----------------------------------------------------------------------------+
 | Processes:                                                       GPU Memory |
 |  GPU       PID   Type   Process name                             Usage      |
 |=============================================================================|
 |  No running processes found                                                 |
 +-----------------------------------------------------------------------------+
 
 ***CPU***
 Architecture:        x86_64
 CPU op-mode(s):      32-bit, 64-bit
 Byte Order:          Little Endian
 CPU(s):              64
 On-line CPU(s) list: 0-63
 Thread(s) per core:  2
 Core(s) per socket:  16
 Socket(s):           2
 NUMA node(s):        2
 Vendor ID:           GenuineIntel
 CPU family:          6
 Model:               85
 Model name:          Intel(R) Xeon(R) Gold 6130 CPU @ 2.10GHz
 Stepping:            4
 CPU MHz:             2225.967
 BogoMIPS:            4200.00
 Virtualization:      VT-x
 L1d cache:           32K
 L1i cache:           32K
 L2 cache:            1024K
 L3 cache:            22528K
 NUMA node0 CPU(s):   0,2,4,6,8,10,12,14,16,18,20,22,24,26,28,30,32,34,36,38,40,42,44,46,48,50,52,54,56,58,60,62
 NUMA node1 CPU(s):   1,3,5,7,9,11,13,15,17,19,21,23,25,27,29,31,33,35,37,39,41,43,45,47,49,51,53,55,57,59,61,63
 Flags:               fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 cdp_l3 invpcid_single pti intel_ppin ssbd mba ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm cqm mpx rdt_a avx512f avx512dq rdseed adx smap clflushopt clwb intel_pt avx512cd avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local dtherm ida arat pln pts pku ospke md_clear flush_l1d
 
 ***CMake***
 /nvme/0/pgali/envs/cudfdev/bin/cmake
 cmake version 3.18.5
 
 CMake suite maintained and supported by Kitware (kitware.com/cmake).
 
 ***g++***
 /usr/bin/g++
 g++ (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0
 Copyright (C) 2017 Free Software Foundation, Inc.
 This is free software; see the source for copying conditions.  There is NO
 warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 
 
 ***nvcc***
 /usr/local/cuda/bin/nvcc
 nvcc: NVIDIA (R) Cuda compiler driver
 Copyright (c) 2005-2019 NVIDIA Corporation
 Built on Wed_Oct_23_19:24:38_PDT_2019
 Cuda compilation tools, release 10.2, V10.2.89
 
 ***Python***
 /nvme/0/pgali/envs/cudfdev/bin/python
 Python 3.7.10
 
 ***Environment Variables***
 PATH                            : /nvme/0/pgali/envs/cudfdev/bin:/usr/share/swift/usr/bin:/home/nfs/pgali/bin:/home/nfs/pgali/.local/bin:/home/nfs/pgali/anaconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/usr/lib/jvm/default-java/bin:/usr/share/sbt-launcher-packaging/bin/sbt-launch.jar/bin:/usr/lib/spark/bin:/usr/lib/spark/sbin:/usr/local/cuda/bin:/nvme/0/pgali/envs/cudfdev/bin
 LD_LIBRARY_PATH                 : /usr/local/cuda/lib64::/usr/local/cuda/lib64:/usr/local/cuda/extras/CUPTI/lib64
 NUMBAPRO_NVVM                   :
 NUMBAPRO_LIBDEVICE              :
 CONDA_PREFIX                    : /nvme/0/pgali/envs/cudfdev
 PYTHON_PATH                     :
 
 ***conda packages***
 /home/nfs/pgali/anaconda3/condabin/conda
 # packages in environment at /nvme/0/pgali/envs/cudfdev:
 #
 # Name                    Version                   Build  Channel
 _libgcc_mutex             0.1                 conda_forge    conda-forge
 _openmp_mutex             4.5                       1_gnu    conda-forge
 abseil-cpp                20200923.3           h9c3ff4c_0    conda-forge
 alabaster                 0.7.12                     py_0    conda-forge
 apipkg                    1.5                        py_0    conda-forge
 appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
 argon2-cffi               20.1.0           py37h5e8e339_2    conda-forge
 arrow-cpp                 1.0.1           py37hb84ec65_31_cuda    conda-forge
 arrow-cpp-proc            3.0.0                      cuda    conda-forge
 async_generator           1.10                       py_0    conda-forge
 attrs                     20.3.0             pyhd3deb0d_0    conda-forge
 aws-c-cal                 0.4.5                h2ff795d_6    conda-forge
 aws-c-common              0.4.67               h7f98852_0    conda-forge
 aws-c-event-stream        0.2.6                h4285e0c_4    conda-forge
 aws-c-io                  0.8.3                h3b39b8c_1    conda-forge
 aws-checksums             0.1.11               h3b39b8c_1    conda-forge
 aws-sdk-cpp               1.8.138              h9e0957a_1    conda-forge
 babel                     2.9.0              pyhd3deb0d_0    conda-forge
 backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
 backports                 1.0                        py_2    conda-forge
 backports.functools_lru_cache 1.6.1                      py_0    conda-forge
 black                     19.10b0                    py_4    conda-forge
 bleach                    3.3.0              pyh44b312d_0    conda-forge
 bokeh                     2.2.3            py37h89c1867_0    conda-forge
 boost-cpp                 1.75.0               hc6e9bd1_0    conda-forge
 brotli                    1.0.9                h9c3ff4c_4    conda-forge
 brotlipy                  0.7.0           py37h5e8e339_1001    conda-forge
 bzip2                     1.0.8                h7f98852_4    conda-forge
 c-ares                    1.17.1               h36c2ea0_0    conda-forge
 ca-certificates           2020.12.5            ha878542_0    conda-forge
 certifi                   2020.12.5        py37h89c1867_1    conda-forge
 cffi                      1.14.5           py37hc58025e_0    conda-forge
 cfgv                      3.2.0                      py_0    conda-forge
 chardet                   4.0.0            py37h89c1867_1    conda-forge
 clang                     8.0.1                hc9558a2_2    conda-forge
 clang-tools               8.0.1                hc9558a2_2    conda-forge
 clangxx                   8.0.1                         2    conda-forge
 click                     7.1.2              pyh9f0ad1d_0    conda-forge
 cloudpickle               1.6.0                      py_0    conda-forge
 cmake                     3.18.5               h1f3970d_0    rapidsai-nightly
 cmake_setuptools          0.1.3                      py_0    rapidsai
 colorama                  0.4.4              pyh9f0ad1d_0    conda-forge
 commonmark                0.9.1                      py_0    conda-forge
 cryptography              3.4.4            py37hf1a17b8_0    conda-forge
 cudatoolkit               10.2.89              h6bb024c_0    nvidia
 cudf                      0.19.0a0+158.gd8ff5349d5.dirty          pypi_0    pypi
 cudnn                     7.6.5.32             h01f27c4_1    conda-forge
 cupy                      8.4.0            py37hca4e673_1    conda-forge
 cython                    0.29.22          py37hcd2ae1e_0    conda-forge
 cytoolz                   0.11.0           py37h5e8e339_3    conda-forge
 dask                      2021.2.0+27.gadb58fa7          pypi_0    pypi
 dask-cudf                 branch-0.19-latest-72.g5e6855ddf8.dirty          pypi_0    pypi
 decorator                 4.4.2                      py_0    conda-forge
 defusedxml                0.6.0                      py_0    conda-forge
 distlib                   0.3.1              pyh9f0ad1d_0    conda-forge
 distributed               2021.2.0+9.g71464491          pypi_0    pypi
 dlpack                    0.3                  he1b5a44_1    conda-forge
 docutils                  0.16             py37h89c1867_3    conda-forge
 double-conversion         3.1.5                he1b5a44_2    conda-forge
 editdistance              0.5.3            py37hcd2ae1e_3    conda-forge
 entrypoints               0.3             pyhd8ed1ab_1003    conda-forge
 execnet                   1.8.0              pyh44b312d_0    conda-forge
 expat                     2.2.10               h9c3ff4c_0    conda-forge
 fastavro                  1.3.2            py37h5e8e339_0    conda-forge
 fastrlock                 0.5              py37hcd2ae1e_2    conda-forge
 filelock                  3.0.12             pyh9f0ad1d_0    conda-forge
 flake8                    3.8.3                      py_1    conda-forge
 flatbuffers               1.12.0               h58526e2_0    conda-forge
 freetype                  2.10.4               h0708190_1    conda-forge
 fsspec                    0.8.6              pyhd8ed1ab_0    conda-forge
 future                    0.18.2           py37h89c1867_3    conda-forge
 gflags                    2.2.2             he1b5a44_1004    conda-forge
 glog                      0.4.0                h49b9bf7_3    conda-forge
 gmp                       6.2.1                h58526e2_0    conda-forge
 grpc-cpp                  1.35.0               h7919d58_1    conda-forge
 heapdict                  1.0.1                      py_0    conda-forge
 hypothesis                6.3.0              pyhd8ed1ab_0    conda-forge
 icu                       68.1                 h58526e2_0    conda-forge
 identify                  1.5.14             pyh44b312d_0    conda-forge
 idna                      2.10               pyh9f0ad1d_0    conda-forge
 imagesize                 1.2.0                      py_0    conda-forge
 importlib-metadata        3.4.0            py37h89c1867_0    conda-forge
 importlib_metadata        3.4.0                hd8ed1ab_0    conda-forge
 iniconfig                 1.1.1              pyh9f0ad1d_0    conda-forge
 ipykernel                 5.5.0            py37h888b3d9_1    conda-forge
 ipython                   7.20.0           py37h888b3d9_2    conda-forge
 ipython_genutils          0.2.0                      py_1    conda-forge
 isort                     5.0.7            py37hc8dfbb8_0    conda-forge
 jedi                      0.18.0           py37h89c1867_2    conda-forge
 jinja2                    2.11.3             pyh44b312d_0    conda-forge
 jpeg                      9d                   h36c2ea0_0    conda-forge
 jsonschema                3.2.0                      py_2    conda-forge
 jupyter_client            6.1.11             pyhd8ed1ab_1    conda-forge
 jupyter_core              4.7.1            py37h89c1867_0    conda-forge
 jupyterlab_pygments       0.1.2              pyh9f0ad1d_0    conda-forge
 krb5                      1.17.2               h926e7f8_0    conda-forge
 lcms2                     2.12                 hddcbb42_0    conda-forge
 ld_impl_linux-64          2.35.1               hea4e1c9_2    conda-forge
 libblas                   3.9.0                8_openblas    conda-forge
 libcblas                  3.9.0                8_openblas    conda-forge
 libcurl                   7.71.1               hcdd3856_8    conda-forge
 libedit                   3.1.20191231         he28a2e2_2    conda-forge
 libev                     4.33                 h516909a_1    conda-forge
 libevent                  2.1.10               hcdb4288_3    conda-forge
 libffi                    3.3                  h58526e2_2    conda-forge
 libgcc-ng                 9.3.0               h2828fa1_18    conda-forge
 libgfortran-ng            9.3.0               hff62375_18    conda-forge
 libgfortran5              9.3.0               hff62375_18    conda-forge
 libgomp                   9.3.0               h2828fa1_18    conda-forge
 liblapack                 3.9.0                8_openblas    conda-forge
 libllvm10                 10.0.1               he513fc3_3    conda-forge
 libllvm8                  8.0.1                hc9558a2_0    conda-forge
 libnghttp2                1.43.0               h812cca2_0    conda-forge
 libopenblas               0.3.12          pthreads_h4812303_1    conda-forge
 libpng                    1.6.37               h21135ba_2    conda-forge
 libprotobuf               3.15.1               h780b84a_0    conda-forge
 librmm                    0.19.0a210223   cuda10.2_ge737e68_25    rapidsai-nightly
 libsodium                 1.0.18               h36c2ea0_1    conda-forge
 libssh2                   1.9.0                hab1572f_5    conda-forge
 libstdcxx-ng              9.3.0               h6de172a_18    conda-forge
 libthrift                 0.13.0               h5aa387f_6    conda-forge
 libtiff                   4.2.0                hdc55705_0    conda-forge
 libutf8proc               2.6.1                h7f98852_0    conda-forge
 libuv                     1.41.0               h7f98852_0    conda-forge
 libwebp-base              1.2.0                h7f98852_0    conda-forge
 llvmlite                  0.35.0           py37h9d7f4d0_1    conda-forge
 locket                    0.2.0                      py_2    conda-forge
 lz4-c                     1.9.3                h9c3ff4c_0    conda-forge
 markdown                  3.3.3              pyh9f0ad1d_0    conda-forge
 markupsafe                1.1.1            py37h5e8e339_3    conda-forge
 mccabe                    0.6.1                      py_1    conda-forge
 mimesis                   4.0.0              pyh9f0ad1d_0    conda-forge
 mistune                   0.8.4           py37h5e8e339_1003    conda-forge
 more-itertools            8.7.0              pyhd8ed1ab_0    conda-forge
 msgpack-python            1.0.2            py37h2527ec5_1    conda-forge
 mypy                      0.782                      py_0    conda-forge
 mypy_extensions           0.4.3            py37h89c1867_3    conda-forge
 nbclient                  0.5.2              pyhd8ed1ab_0    conda-forge
 nbconvert                 6.0.7            py37h89c1867_3    conda-forge
 nbformat                  5.1.2              pyhd8ed1ab_1    conda-forge
 nbsphinx                  0.8.1              pyh44b312d_0    conda-forge
 nccl                      2.8.4.1              h1a5f58c_1    conda-forge
 ncurses                   6.2                  h58526e2_4    conda-forge
 nest-asyncio              1.4.3              pyhd8ed1ab_0    conda-forge
 nodeenv                   1.5.0              pyh9f0ad1d_0    conda-forge
 notebook                  6.2.0            py37h89c1867_0    conda-forge
 numba                     0.52.0           py37hdc94413_0    conda-forge
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@galipremsagar galipremsagar added bug Something isn't working Python Affects Python cuDF API. labels Feb 25, 2021
@galipremsagar galipremsagar self-assigned this Feb 25, 2021
@kkraus14
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I think we should only handle null in this situation and we should treat NaN as just another value that should be in the dictionary in order to be assigned.

@brandon-b-miller
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We may want to consider inheriting cudf.NA from pd.NA, which may at least resolve places where they produce different results.

@kkraus14
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Ideally cudf.NA could be a device scalar as well but I imagine that would be tricky based on the nature of pd.NA not being typed.

@brandon-b-miller
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We technically have those, they're just typed. They basically represent libcudf scalars of a certain type with the validity set to be false. cudf.NA is their .value though regardless of the type.

@galipremsagar galipremsagar linked a pull request Feb 26, 2021 that will close this issue
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rapids-bot bot pushed a commit that referenced this issue Feb 26, 2021
Fixes: #7367, #7446

This PR upgrades pandas to `1.2.2` in `cudf`. Changes include:

- [x] Bumping up `pandas` version.
- [x] Fixing `isin` behavior which now takes in types into accout: pandas-dev/pandas#38781
- [x] `CategoricalColumn.__setitem__` will now not allow setting of values that are not in existing categories.
- [x] Introduced `cudf.core._compat.PANDAS_GE_120` variable to create back-ward compatibility.
- [x] Updated usages of `pd.core.tools.datetimes._guess_datetime_format` to `pd.core.tools.datetimes.guess_datetime_format`
- [x] Introduced `std` & `median` in `DateTimeColumn`.
- [x] Fixed incorrect handling of passing `StringMethods` as an input to methods in string APIs.
- [x] Fixed a typo in calling `is_valid` of `Scalar`.
- [x] Removed unnecessary special handling in `TimeDeltaColumn.sum` logic for empty inputs.
- [x] Introduced passing `dtype='float64'` wherever there is an empty series being created since pandas will soon be defaulting to `object` dtype if no type is passed and we don't have a perfectly resembling `object` dtype as that of pandas.
- [x] Fixed deprecation warnings of `Index.__or__` and `Index.__xor__` by replacing with `union` & `symmetric_difference` APIs.
- [x] Introduced mapping of our `float32` & `float64` dtypes to pandas Nullable dtypes `FLoat32Dtype` & `Float64Dtype` when `nullable=True` in `to_pandas`.
- [x] With introduction of nullable float dtypes, there is an issue in creating `MultiIndex` from dataframe: pandas-dev/pandas#39984, so introduced a workaround in our `MultiIndex.__repr__` code.
- [x] Removed usages of `check_less_precise` in our code-base as this is deprecated and is replaced with `rtol` & `atol`. Retained its usages in our testing APIs for back-ward compatibility.
- [x] Removed good number `xfail` cases which are actually passing right now because of resolved issues in both `pandas` & `cudf`.
- [x] Did some miscellaneous code-cleanup in pytests.
- [x] Fixed pytests that will fail when run in parallel due to access to shared pytest params being manipulated inplace.
- [x] Follow a standard import pattern across pytest files, some files do `from pandas import Series` and some do `from cudf.core import Series`. So removed both patterns and doing only simple `import cudf` & `import pandas as pd` to avoid confusion while debugging test failures across multiple files. (Made this change in all pytest files which I had to touch as part of pandas upgrade, we can make similar changes in future for the files which we touch).
- [x] Fix issue with assigning `np.nan` values to a `CategoricalColumn` and fix related `__repr__` code: #7446

Authors:
  - GALI PREM SAGAR (@galipremsagar)

Approvers:
  - Keith Kraus (@kkraus14)
  - AJ Schmidt (@ajschmidt8)

URL: #7375
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