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Unable to import 'collections.abc' using python 3.13.1 #10112

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Christian-B opened this issue Dec 6, 2024 · 21 comments · Fixed by pylint-dev/astroid#2647, pylint-dev/astroid#2665 or #10125
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Bug 🪲 High priority Issue with more than 10 reactions
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@Christian-B
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Christian-B commented Dec 6, 2024

Bug description

import collections.abc

Configuration

Command used

We use a complex github actions but notice the change when python updated to 3.13.1
using pylint-3.3.2

Pylint output

************* Module spinn_utilities.checker
spinn_utilities/checker.py:1:0: C0304: Final newline missing (missing-final-newline)
spinn_utilities/checker.py:1:0: E0401: Unable to import 'collections.abc' (import-error)
spinn_utilities/checker.py:1:0: W0611: Unused import collections.abc (unused-import)

Expected behavior

Not seeing the Unable to import 'collections.abc' (import-error)

Other messages are due to the tiny example

likely due to
python/cpython@d46d291

Pylint version

Python 3.13.1

Did not happen with 
Python 3.13.0

OS / Environment

tested with github actions using
Ubuntu
22.04.5
LTS

Additional dependencies

@jacobtylerwalls
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Thanks, we'll jump on this 👍

@jacobtylerwalls jacobtylerwalls added Bug 🪲 High priority Issue with more than 10 reactions and removed Needs triage 📥 Just created, needs acknowledgment, triage, and proper labelling labels Dec 7, 2024
@jacobtylerwalls
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Reopening to keep visibility until we bump astroid later today.

@jacobtylerwalls
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Polling other contributors, can anyone reproduce this locally? @zenlyj @mbyrnepr2

@mbyrnepr2
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LGTM @jacobtylerwalls

(venv3131) markbyrne@Marks-MacBook-Air-2 programming % python -m pylint --version
pylint 4.0.0-dev0
astroid 3.3.6
Python 3.13.1 (v3.13.1:06714517797, Dec  3 2024, 14:00:22) [Clang 15.0.0 (clang-1500.3.9.4)]
(venv3131) markbyrne@Marks-MacBook-Air-2 programming % cat x.py
import collections.abc
(venv3131) markbyrne@Marks-MacBook-Air-2 programming % python -V
Python 3.13.1
(venv3131) markbyrne@Marks-MacBook-Air-2 programming % python -m pylint x.py
************* Module x
x.py:1:0: C0114: Missing module docstring (missing-module-docstring)
x.py:1:0: W0611: Unused import collections.abc (unused-import)

------------------------------------------------------------------
Your code has been rated at 0.00/10 (previous run: 0.00/10, +0.00)

(venv3131) markbyrne@Marks-MacBook-Air-2 programming % 

@zenlyj
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zenlyj commented Dec 9, 2024

reproducible on my end

import.py:1:0: E0401: Unable to import 'collections.abc' (import-error)
import.py:1:0: W0611: Unused import collections.abc (unused-import)

with the following:

pylint 4.0.0-dev0 (latest main)
astroid 3.3.5 & 3.3.6
Python 3.13.1

@jacobtylerwalls
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Thanks. By chance is anyone testing on linux locally? If it wasn't clear, I have doubts that astroid 3.3.6 fixed anything.

@Pierre-Sassoulas
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I have linux but didn't find an easy way to install 3.13.1 yet.

@zenlyj
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zenlyj commented Dec 9, 2024

i got the error testing with astroid 3.3.6

environment is WSL2, Ubuntu 20.04.6 LTS if it helps

@Torom
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Torom commented Dec 9, 2024

Here you can see my failed GitHub action due to the error: https://github.com/Torom/BotLi/actions/runs/12241011421/job/34145142509

Python 3.13.1
astroid-3.3.6
dill-0.3.9
isort-5.13.2
mccabe-0.7.0
platformdirs-4.3.6
pylint-3.3.2
tomlkit-0.13.2

@jacobtylerwalls
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Thanks, our own actions are failing too, however I'm doubtful we can work on it until we have a contributor who can debug it locally.

@Torom
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Torom commented Dec 9, 2024

I have linux but didn't find an easy way to install 3.13.1 yet.

With https://github.com/pyenv/pyenv it is very easy to install any Python version, including 3.13.1.

@Pierre-Sassoulas
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Thank you @Torom ! I managed to fix my issue with uv self update (then 3.13.1 is available)

@Pierre-Sassoulas
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All right, I can reproduce the collections.abc issue locally. On main:

pylint 4.0.0-dev0
astroid 3.3.5
Python 3.13.1 (main, Dec  6 2024, 18:40:43) [Clang 18.1.8 ]

Switching to dependabot/pip/astroid-3.3.6 I also reproduce with:

pylint 4.0.0-dev0
astroid 3.3.6
Python 3.13.1 (main, Dec  6 2024, 18:40:43) [Clang 18.1.8 ]

I'm wondering if the race condition fixed in the initial issue is bypassing our astroid brain mechanism, but this is just intuition. Let me know if there's any particular test/debug I could do Jacob, I'll be able to dig into this in ~= 20 hours.

@jacobtylerwalls
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Wonderful. I'd sniff around do_import_module(), maybe see if turning use_cache off helps? And also play with reverting the 3.3.6 change.

Torom added a commit to Torom/BotLi that referenced this issue Dec 16, 2024
KKoukiou added a commit to KKoukiou/anaconda that referenced this issue Dec 16, 2024
python-3.13.1 broke compatibility with pylint.

Revert this one the pylint issue [1] is fixed.

[1] pylint-dev/pylint#10112
[2] pylint-dev/astroid#2656
xavierog added a commit to xavierog/moulti that referenced this issue Dec 16, 2024
The bug is:
pylint-dev/pylint#10112

Fortunately, collections.abc is used only once, in the Ansible plugin, for type
checking.
xavierog added a commit to xavierog/moulti that referenced this issue Dec 16, 2024
The bug is:
pylint-dev/pylint#10112

Fortunately, collections.abc is used only once, in the Ansible plugin, for type
checking.
rvykydal pushed a commit to rvykydal/anaconda that referenced this issue Dec 17, 2024
python-3.13.1 broke compatibility with pylint.

Revert this one the pylint issue [1] is fixed.

[1] pylint-dev/pylint#10112
[2] pylint-dev/astroid#2656
chriskuehl added a commit to reddit/baseplate.py that referenced this issue Dec 18, 2024
@DanielNoord
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Fix for astroid in pylint-dev/astroid#2657. Please review if you have the time.

If anybody who is running into this issue could try to test out the astroid version of that branch to confirm that it fixes the issues that would be awesome. At least on my machine it does reproduce and with that fix it doesn't.

skirpichev added a commit to diofant/diofant that referenced this issue Dec 19, 2024
That's a workaround for pylint-dev/pylint#10112.

Also, properly filter out linting for "schedule" event.
chriskuehl added a commit to reddit/baseplate.py that referenced this issue Dec 19, 2024
@jacobtylerwalls jacobtylerwalls linked a pull request Dec 24, 2024 that will close this issue
chriskuehl added a commit to reddit/baseplate.py that referenced this issue Jan 7, 2025
* Run tests under 3.13.0-rc2

* Work around lack of wheels for some packages

* Use newer gevent on Python 3.13

* Use Python 3.13 final

* Add legacy-cgi package on Python>=3.13

* Require grpcio>=1.66.2 on 3.13

* Require gevent>=24.10.3 on 3.13

* poetry lock --no-update

* poetry update pylint

* Upgrade psycopg2

* Require newer confluent-kafka on Python 3.13

* Ignore mypy error

* Add pylint import-error disable for collections.abc

Workaround for pylint-dev/pylint#10112

* Upgrade some pytest-related packages

* Fix some tests broken by package upgrades

* Fix missing teardown functions in cassandra tests

These caused tests to hang under Python 3.13.

* Remove now-unnecessary workarounds for packages without wheels

* poetry update

* Remove now-unnecessary "type: ignore" comment
@Christian-B
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We have enabled the github action which found this issue.
It used the latest version of all dependencies including astroid-3.3.8

Pylint works fine!

lengau pushed a commit to canonical/charmcraft that referenced this issue Jan 14, 2025
This PR contains the following updates:

| Package | Type | Update | Change | Pending | Age | Adoption | Passing
| Confidence |
|---|---|---|---|---|---|---|---|---|
|
[astral-sh/ruff-pre-commit](https://redirect.github.com/astral-sh/ruff-pre-commit)
| repository | patch | `v0.9.0` -> `v0.9.1` | |
[![age](https://developer.mend.io/api/mc/badges/age/github-tags/astral-sh%2fruff-pre-commit/v0.9.1?slim=true)](https://docs.renovatebot.com/merge-confidence/)
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|
| [astroid](https://redirect.github.com/pylint-dev/astroid) | | patch |
`==3.3.6` -> `==3.3.8` | |
[![age](https://developer.mend.io/api/mc/badges/age/pypi/astroid/3.3.8?slim=true)](https://docs.renovatebot.com/merge-confidence/)
|
[![adoption](https://developer.mend.io/api/mc/badges/adoption/pypi/astroid/3.3.8?slim=true)](https://docs.renovatebot.com/merge-confidence/)
|
[![passing](https://developer.mend.io/api/mc/badges/compatibility/pypi/astroid/3.3.6/3.3.8?slim=true)](https://docs.renovatebot.com/merge-confidence/)
|
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|
|
[charset-normalizer](https://redirect.github.com/jawah/charset_normalizer)
([changelog](https://redirect.github.com/jawah/charset_normalizer/blob/master/CHANGELOG.md))
| | patch | `==3.4.0` -> `==3.4.1` | |
[![age](https://developer.mend.io/api/mc/badges/age/pypi/charset-normalizer/3.4.1?slim=true)](https://docs.renovatebot.com/merge-confidence/)
|
[![adoption](https://developer.mend.io/api/mc/badges/adoption/pypi/charset-normalizer/3.4.1?slim=true)](https://docs.renovatebot.com/merge-confidence/)
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|
| [coverage](https://redirect.github.com/nedbat/coveragepy) | | patch |
`==7.6.9` -> `==7.6.10` | |
[![age](https://developer.mend.io/api/mc/badges/age/pypi/coverage/7.6.10?slim=true)](https://docs.renovatebot.com/merge-confidence/)
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[![confidence](https://developer.mend.io/api/mc/badges/confidence/pypi/coverage/7.6.9/7.6.10?slim=true)](https://docs.renovatebot.com/merge-confidence/)
|
| [pylint](https://redirect.github.com/pylint-dev/pylint)
([changelog](https://pylint.readthedocs.io/en/latest/whatsnew/3/)) | |
patch | `==3.3.2` -> `==3.3.3` | |
[![age](https://developer.mend.io/api/mc/badges/age/pypi/pylint/3.3.3?slim=true)](https://docs.renovatebot.com/merge-confidence/)
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| pyparsing | | patch | `==3.2.0` -> `==3.2.1` | |
[![age](https://developer.mend.io/api/mc/badges/age/pypi/pyparsing/3.2.1?slim=true)](https://docs.renovatebot.com/merge-confidence/)
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|
|
[pytest-subprocess](https://redirect.github.com/aklajnert/pytest-subprocess)
| | patch | `==1.5.2` -> `==1.5.3` | |
[![age](https://developer.mend.io/api/mc/badges/age/pypi/pytest-subprocess/1.5.3?slim=true)](https://docs.renovatebot.com/merge-confidence/)
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|
| [responses](https://redirect.github.com/getsentry/responses)
([changelog](https://redirect.github.com/getsentry/responses/blob/master/CHANGES))
| | patch | `==0.25.3` -> `==0.25.5` | `0.25.6` |
[![age](https://developer.mend.io/api/mc/badges/age/pypi/responses/0.25.5?slim=true)](https://docs.renovatebot.com/merge-confidence/)
|
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|

Note: The `pre-commit` manager in Renovate is not supported by the
`pre-commit` maintainers or community. Please do not report any problems
there, instead [create a Discussion in the Renovate
repository](https://redirect.github.com/renovatebot/renovate/discussions/new)
if you have any questions.

---

### Release Notes

<details>
<summary>astral-sh/ruff-pre-commit (astral-sh/ruff-pre-commit)</summary>

###
[`v0.9.1`](https://redirect.github.com/astral-sh/ruff-pre-commit/releases/tag/v0.9.1)

[Compare
Source](https://redirect.github.com/astral-sh/ruff-pre-commit/compare/v0.9.0...v0.9.1)

See: https://github.com/astral-sh/ruff/releases/tag/0.9.1

</details>

<details>
<summary>pylint-dev/astroid (astroid)</summary>

###
[`v3.3.8`](https://redirect.github.com/pylint-dev/astroid/blob/HEAD/ChangeLog#Whats-New-in-astroid-338)

[Compare
Source](https://redirect.github.com/pylint-dev/astroid/compare/v3.3.7...v3.3.8)

\============================
Release date: 2024-12-23

- Fix inability to import `collections.abc` in python 3.13.1. The
reported fixes in astroid 3.3.6
    and 3.3.7 did not actually fix this issue.

Closes
[pylint-dev/pylint#10112](https://redirect.github.com/pylint-dev/pylint/issues/10112)

###
[`v3.3.7`](https://redirect.github.com/pylint-dev/astroid/blob/HEAD/ChangeLog#Whats-New-in-astroid-337)

[Compare
Source](https://redirect.github.com/pylint-dev/astroid/compare/v3.3.6...v3.3.7)

\============================
Release date: 2024-12-20

This release was yanked.

- Fix inability to import `collections.abc` in python 3.13.1. The
reported fix in astroid 3.3.6
    did not actually fix this issue.

Closes
[pylint-dev/pylint#10112](https://redirect.github.com/pylint-dev/pylint/issues/10112)

</details>

<details>
<summary>jawah/charset_normalizer (charset-normalizer)</summary>

###
[`v3.4.1`](https://redirect.github.com/jawah/charset_normalizer/blob/HEAD/CHANGELOG.md#341-2024-12-24)

[Compare
Source](https://redirect.github.com/jawah/charset_normalizer/compare/3.4.0...3.4.1)

##### Changed

- Project metadata are now stored using `pyproject.toml` instead of
`setup.cfg` using setuptools as the build backend.
- Enforce annotation delayed loading for a simpler and consistent types
in the project.
- Optional mypyc compilation upgraded to version 1.14 for Python >= 3.8

##### Added

-   pre-commit configuration.
-   noxfile.

##### Removed

- `build-requirements.txt` as per using `pyproject.toml` native build
configuration.
- `bin/integration.py` and `bin/serve.py` in favor of downstream
integration test (see noxfile).
-   `setup.cfg` in favor of `pyproject.toml` metadata configuration.
-   Unused `utils.range_scan` function.

##### Fixed

- Converting content to Unicode bytes may insert `utf_8` instead of
preferred `utf-8`.
([#&#8203;572](https://redirect.github.com/jawah/charset_normalizer/issues/572))
- Deprecation warning "'count' is passed as positional argument" when
converting to Unicode bytes on Python 3.13+

</details>

<details>
<summary>nedbat/coveragepy (coverage)</summary>

###
[`v7.6.10`](https://redirect.github.com/nedbat/coveragepy/blob/HEAD/CHANGES.rst#Version-7610--2024-12-26)

[Compare
Source](https://redirect.github.com/nedbat/coveragepy/compare/7.6.9...7.6.10)

- Fix: some descriptions of missing branches in HTML and LCOV reports
were
incorrect when multi-line statements were involved (`issue 1874`\_ and
`issue
    1875`\_).  These are now fixed.

- Fix: Python 3.14 `defers evaluation of annotations <pep649_>`\_ by
moving them
into separate code objects. That code is rarely executed, so coverage.py
would mark them as missing, as reported in `issue 1908`\_. Now they are
    ignored by coverage automatically.

- Fixed an obscure and mysterious problem on PyPy 3.10 seemingly
involving
mocks, imports, and trace functions: `issue 1902`\_. To be honest, I
don't
understand the problem or the solution, but `git bisect` helped find it,
    and now it's fixed.

- Docs: re-wrote the :ref:`subprocess` page to put multiprocessing first
and to
highlight the correct use of :class:`multiprocessing.Pool
<python:multiprocessing.pool.Pool>`.

.. \_issue
1874:[https://github.com/nedbat/coveragepy/issues/1874](https://redirect.github.com/nedbat/coveragepy/issues/1874)4
.. \_issue
1875[https://github.com/nedbat/coveragepy/issues/1875](https://redirect.github.com/nedbat/coveragepy/issues/1875)75
.. \_issue
190[https://github.com/nedbat/coveragepy/issues/1902](https://redirect.github.com/nedbat/coveragepy/issues/1902)902
.. \_issue
19[https://github.com/nedbat/coveragepy/issues/1908](https://redirect.github.com/nedbat/coveragepy/issues/1908)1908
.. \_pep649:
https://docs.python.org/3.14/whatsnew/3.14.html#pep-649-deferred-evaluation-of-annotations

.. \_changes\_7-6-9:

</details>

<details>
<summary>pylint-dev/pylint (pylint)</summary>

###
[`v3.3.3`](https://redirect.github.com/pylint-dev/pylint/releases/tag/v3.3.3)

[Compare
Source](https://redirect.github.com/pylint-dev/pylint/compare/v3.3.2...v3.3.3)

## What's new in Pylint 3.3.3?

Release date: 2024-12-23

## False Positives Fixed

- Fix false positives for `undefined-variable` for classes using Python
3.12
    generic type syntax.

Closes
[#&#8203;9335](https://redirect.github.com/pylint-dev/pylint/issues/9335)

- Fix a false positive for `use-implicit-booleaness-not-len`. No lint
should be emitted for
    generators (`len` is not defined for generators).

Refs
[#&#8203;10100](https://redirect.github.com/pylint-dev/pylint/issues/10100)

## Other Bug Fixes

- Fix `Unable to import 'collections.abc' (import-error)` on Python
3.13.1.

Closes
[#&#8203;10112](https://redirect.github.com/pylint-dev/pylint/issues/10112)

</details>

<details>
<summary>aklajnert/pytest-subprocess (pytest-subprocess)</summary>

###
[`v1.5.3`](https://redirect.github.com/aklajnert/pytest-subprocess/blob/HEAD/HISTORY.rst#153-2025-01-04)

[Compare
Source](https://redirect.github.com/aklajnert/pytest-subprocess/compare/1.5.2...1.5.3)

Features

* `#&#8203;171
<https://github.com/aklajnert/pytest-subprocess/pull/171>`_,
`#&#8203;178
<https://github.com/aklajnert/pytest-subprocess/pull/178>`_: Allow to
access keyword arguments passed to Popen.

    Bug fixes  

- `#&#8203;180
<https://github.com/aklajnert/pytest-subprocess/pull/180>`\_: Fixed an
incorrect wait timeout calculation.
- `#&#8203;170
<https://github.com/aklajnert/pytest-subprocess/pull/170>`\_: Wrapped
ProcessDispatcher.dispatch into FakePopenWrapper as it was causing
TypeError when Popen is used as a type.
- `#&#8203;169
<https://github.com/aklajnert/pytest-subprocess/pull/169>`\_: Get rid of
using thread in AsyncFakePopen as it causes thread.join() to hang
indefinitely.

</details>

<details>
<summary>getsentry/responses (responses)</summary>

###
[`v0.25.5`](https://redirect.github.com/getsentry/responses/blob/HEAD/CHANGES#0255)

[Compare
Source](https://redirect.github.com/getsentry/responses/compare/0.25.3...0.25.5)

-   Fix readme issue that prevented 0.25.4 from being published to pypi.

</details>

---

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