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Merge in develop of UFS and point to updated WW3 #14

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merged 27 commits into from
Mar 13, 2023

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mdtoyNOAA and others added 27 commits December 22, 2022 12:42
* Enhanced stability of drag_suite module and added diagnostics

* Added new UGWP diagnostic variables to parm/diag_table/diag_table_rap

* Bug fixes to rap, hrrr and rrfs test description files and tests/parm/rap.nml.IN

* Updated standard_names for do_gsl_drag_ls_bl, do_gsl_drag_ss, do_gsl_drag_tofd and ugwp_seq_update

* Incorporated dustinswales suggestions in ccpp-physics PR#22

* Assumed-shape in gwdps.f

* Added logical flag 'ugwp_seq_update' to gfs_physics_nml namelist

* Modified calculation of dtfac in drag_suite.F90 and revised various long_name's of diagnostic variables

* Removed passage of variables 'ak' and 'bk' to drag_suite -- these are no longer used

* Removed unused variables from GFS_typedefs.F90 and added clarifying comments in ccpp-physics

Co-authored-by: JONG KIM <[email protected]>
…nity#1523)

* Convert all regression tests to use esmf-managed threading

* update CMakeLists.txt

* update rt.conf

* Comment out unneeded steps in workflows/aux.yml

* turn off control_c384 on cheyenne: all others passed

Co-authored-by: Bin.Li <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: jkbk2004 <[email protected]>
…mmunity#1535)

* allow option no updated sub-components

* Run control_c384 and control_c384gdas tests on Gaea using TPN=18

Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: jkbk2004 <[email protected]>
* clean up gitaction yml

* Update build_test.yml, aux.yml
* fix fd_nems.yaml

* cmeps restart will appear as different because field names changes

* set TPN=18 on cheyenne: cpld_control_c192_p8, cpld_restart_c192_p8, hafs_global_multiple_4nests_atm

Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: jkbk2004 <[email protected]>
* MYNNsfc uniform real kind

Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: jkbk2004 <[email protected]>
…y#1560)

* Updated FV3 hash, Bring in Fengsha and Pt Source input files, bring in updated aqm.rc

Co-authored-by: Raffaele Montuoro <[email protected]>
…ade (ufs-community#1554)

* SUPAFAST option sets build flags ideal for HAFS

* add test for HAFS with -DSUPAFAST=ON

* SUPAFAST=>TEST_FASTER_INTEL and add -no-ip to CMAKE_Fortran_FLAGS_RELEASE

* TEST_FASTER_INTEL => FASTER

* Update rt_single function in rt.sh to parse correct .conf file

* Remove fail_test file after model run only if Rocoto is used

* Use -xSSE4.2 on GAEA

* turn off regional_atmaq_debug on gaea: time limit

Co-authored-by: Dusan Jovic <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: JONG KIM <[email protected]>
…dates (ufs-community#1544)

* Update submodule FV3/upp and use a newer version of g2tmpl/1.10.2.

* Update submodule FV3 and switch to use the unified ugwp scheme for HAFS regression tests.

* Update submodule HYCOM-interface/HYCOM and HYCOM-interface/CMakeLists.txt
so that the debug build options will work properly for the HYCOM subcomponent.

* Update tests/parm/postxconfig-NT-hafs.txt by using FV3/upp/parm/postxconfig-NT-hafs_nosat.txt

* Fixed bug in calculation of nest halo weights identified by Biju Thomas in DDEBUG=ON builds.

Co-authored-by: William Ramstrom <[email protected]>
Co-authored-by: JONG KIM <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
* Remove -xHOST from CICE CMakeLists.txt. ufs-community#1262

Co-authored-by: [David Huber] <[[email protected]]>
Co-authored-by: JONG KIM <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
* reverting the bug fix for ktherm=2 allows all cpld tests to pass
and the single datm test using ktherm=2 (datm_cdeps_gfs) to also pass
all other datm tests which use ktherm=1 fail

Co-authored-by: JONG KIM <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
…ufs-community#1566)

* adding regional control back to jenkins-ci (ufs-community#37)

* Create ESMF field attributes using the same kind as field data values

Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: jkbk2004 <[email protected]>
…ommunity#1582)

* Bug fix for cloud effective radius for convective clouds (HR1)
* RRTMGP refactoring

* Added RRTMGP p8 coupled RT. Update other GP RTs.

* Adding GP physics blocking to UFS GP RT configurations

* Trim old RRTMGP RTs

* Interface changes for SP build in GP

Co-authored-by: JONG KIM <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
* hpc stack internal location changes and ORT fix

Co-authored-by: JONG KIM <[email protected]>
… (3) hafs bug fix (ufs-community#1606)

* updates for movingnest debug mode

* add hafs_regional_storm_following_1nest_atm_ocn_debug test

* point MOM6 to test branch

* remove cpld_esmfthreads_p8

Co-authored-by: Jun Wang <[email protected]>
Co-authored-by: JONG KIM <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: zach1221 <[email protected]>
…OAH and NOAH MP LSM, and rename nsradar_reset (ufs-community#1529)

* Six new winter wx diags, new precip ice density for RUC, NOAH MP and NOAH LSMs, new namelist parameter for nsradar_reset, new flat files for GFS and fv3lam to properly handle new winter wx diags.

* remove six winter wx diags from f00 xml file

* Remove commented out lines related to old computation of precip ice density

* Added 6 winter weather diagnostics + precip ice density (all 2D fields) to select diag_tables

* Use correct postxconfig files

* Include Grant's winter wx mods

Co-authored-by: JONG KIM <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
Co-authored-by: zach1221 <[email protected]>
…ces and turning off output; update FAQ documentation (was 1608); update drag suite intent mods (was 1612) (ufs-community#1597)

* update cdeps

* use fv3atm from PR 1612

* Changed UGWP diagnostic variable declaration intents from out to inout

* Docs/faqupdate (ufs-community#8)

Co-authored-by: Denise Worthen <[email protected]>
Co-authored-by: jkbk2004 <[email protected]>
Co-authored-by: Brian Curtis <[email protected]>
* MOM6 writes restarts in YYYYMMDD.HHMMSS.MOM*nc format
* the final restart is timestamped
* make changes in scripts to remove 'suffix-hours' strings

* remove STORE_CORIOLIS from MOM_input templates

* add timestamp in the end forecast restart filenames for GFS

* FV3atm restart filename format
* Update FV3

* Merge pull request ufs-community#67 from dustinswales/accumulated_cleanup

* Updated physics

* Reverting DISKNM/gaea to original

* add new BL_DATE
…1578)

* Faster Compile option turned on for a compile and test per project

* added sample tests from each project to be tested with faster compile

* HAFS app to be compiled with 64bit
…ble usage of shared pio (ufs-community#1645)

* Gaea system: change in hpc-stack location, miniconda3 (EPIC-managed)

* move DISABLE_FMA to one if at the end

* only disable fma on wcoss if FASTER=ON

* Update CMakeModules to develop; remove STATIC requirement from PIO find.

Co-authored-by: Natalie Perlin <[email protected]>
Co-authored-by: ulmononian <[email protected]>
 Conflicts:
	WW3
	tests/RegressionTests_hera.intel.log
@pjpegion pjpegion merged commit cde838c into pjpegion:fix_wave_init Mar 13, 2023
@JessicaMeixner-NOAA JessicaMeixner-NOAA deleted the fix_wave_init branch March 14, 2023 21:25
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