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command line interface #108

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command line interface #108

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yfukai
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@yfukai yfukai commented Nov 23, 2022

Adding command line interface with click

yfukai and others added 29 commits July 1, 2022 15:19
* udpated transform method

* fixed tests

* fixed typo

* solving problems with tests

* fixed transform bug

* removed tests for rescaling-fitting

* removed resized transform example

* added dask test

* set baseline type to optinal

* updated testdata

* deleted notebook outputs

* Update timelapse

* re-organized transform part

* tests running...

* made the resize method changable

* resize method tested

* tested resize method

* added comments for the transform function

* minor fix

* fixed fitting_weight shape bug

Co-authored-by: Tim Morello <[email protected]>
* updating notebooks

* updated rescaled data

* updated test data

* update notebooks

* Fixed most unit tests

* re-added reference comparison notebook

* re-added test data

Co-authored-by: Nicholas-Schaub <[email protected]>
* udpated transform method

* fixed tests

* fixed typo

* solving problems with tests

* fixed transform bug

* removed tests for rescaling-fitting

* removed resized transform example

* added dask test

* set baseline type to optinal

* updated testdata

* deleted notebook outputs

* Update timelapse

* re-organized transform part

* tests running...

* made the resize method changable

* resize method tested

* tested resize method

* added comments for the transform function

* minor fix

* fixed fitting_weight shape bug

* fixed dask-related bug

Co-authored-by: Tim Morello <[email protected]>
* updated hashes to newer ones

* changed source to main

* ci experiment with dev branch

* updated branch

* added tests for wrong argments

* updated classifier to beta

* updated copyright

* just added spaces

* updated downsampled data to Zenodo

* renamed data to datasets

* typo fix...

* deleted depricated tools

* fixed package names ...

* import fix

* 👥 Update @yfukai as a contributor

* added my contribution for ci...

* removed deprecated routines from old DCT2d

* updated tests and fixed jax version to solve problems
* updated hashes to newer ones

* changed source to main

* ci experiment with dev branch

* updated branch

* added tests for wrong argments

* updated classifier to beta

* updated copyright

* just added spaces

* updated downsampled data to Zenodo

* renamed data to datasets

* typo fix...

* deleted depricated tools

* fixed package names ...

* import fix

* 👥 Update @yfukai as a contributor

* added my contribution for ci...

* removed deprecated routines from old DCT2d

* trying to add darkfield weight and changing weight for ladmap

* fixed typo

* added attribute

* updated tests and fixed jax version to solve problems

* rewrite ladmap to normalize B

* working ver?

* updated test data

* udpated weight for darkfield

* updated test data

* removed print

* fixed normalization const

* added test to show basic does not depend on the intensity scale

* small update
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5 participants