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Old school version #64

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Sep 4, 2023
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ef4c1a9
renku-graph-vis section
burnout87 Jun 29, 2023
9cfd6e3
renku plugin development and links to the two plugins
burnout87 Jun 29, 2023
c4b14b2
addressing comments
burnout87 Jul 4, 2023
847fd8d
addressing some comments
burnout87 Jul 4, 2023
44fac6b
screenshot
burnout87 Jul 4, 2023
0e2c51b
typo
burnout87 Jul 4, 2023
f9d9d10
removing plugin development and added installation guide
burnout87 Jul 5, 2023
ff92004
plugin installations
burnout87 Jul 18, 2023
d52dd14
notes about plugin
burnout87 Jul 18, 2023
9ccfb37
Update content/docs/guide-development.md from Volodymyr
burnout87 Jul 18, 2023
dfbf466
benefits of the plugin and examples pics and animations
burnout87 Jul 18, 2023
e2b9620
more explanation
burnout87 Jul 18, 2023
7820dd6
ontology help
burnout87 Jul 18, 2023
a5fbd10
some adjustments
burnout87 Jul 19, 2023
c70e9d6
addressing comments
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314cfd3
more coincise installation instrctions
burnout87 Jul 19, 2023
f382c63
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1b43c21
not and non
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c2dbeda
ontology
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af8bc4b
more ontology explanation
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880fb9a
ontology
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f5e26a4
addressing comments
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addressing comments
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c1a75d2
formatting link
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Update content/docs/guide-development.md
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23f2e0f
starting a new session and create new project on renkulab
burnout87 Jul 27, 2023
80307a4
see screenshots
burnout87 Jul 28, 2023
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updated animations
burnout87 Jul 31, 2023
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updated animations
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Merge branch 'master' of https://github.com/oda-hub/hugo-odahub
volodymyrss Aug 22, 2023
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72e03f8
ontological build
volodymyrss Aug 23, 2023
dbff20d
change references to local
volodymyrss Aug 23, 2023
c1881b2
contact form suggestion
volodymyrss Aug 23, 2023
b2afe46
Merge branch 'old-school-version' into renku-plugins-docs
burnout87 Aug 30, 2023
e8045ff
dedicated paragraph renku plugins
burnout87 Aug 30, 2023
282fb05
guide to start graph visualization
burnout87 Sep 1, 2023
84963ad
Merge pull request #56 from oda-hub/renku-plugins-docs
volodymyrss Sep 4, 2023
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10 changes: 7 additions & 3 deletions Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@
#cat ../source/odahub-respec/spec.html > ontology-respec/index.html; \
#cat ../source/odahub-respec/rdf > ontology-respec/rdf;

publish: import ontology
publish: ontology
( \
hugo; \
cd public/; \
Expand All @@ -30,16 +30,20 @@ ontology/ontology.ttl: .FORCE
cp ontology/ontology.ttl ontology/ontology.ttl.backup || touch ontology/ontology.ttl
cat ontology/ontology-base.ttl > ontology/ontology.ttl
unzip -p ontology.zip | sed 's@urn:webprotege:ontology:[0-9a-z\-]*@http://odahub.io/ontology@g' >> ontology/ontology.ttl
< ontology/ontology.ttl sed 's/owl:versionIRI ".*"/owl:versionIRI "'$(shell cd ontology; git describe --always --tags)'"/' > ontology/ontology-versionned.ttl
mv -fv ontology/ontology-versionned.ttl ontology/ontology.ttl
(cd ontology; git commit -a -m "update from upstream"; git push)
diff ontology/ontology.ttl ontology/ontology.ttl.backup || echo "an update happened!"
python -c 'import rdflib; print("valid ontology with entries:", len(rdflib.Graph().load(open("ontology/ontology.ttl"), format="turtle")))'

ontology/ontology-platforms.ttl: .FORCE
curl "https://webprotege.obsuks1.unige.ch/download?project=$$(pass oda/webprotege/platforms-projectid)&format=ttl" > ontology.zip
unzip -p ontology.zip | sed 's@urn:webprotege:ontology:[0-9a-z\-]*@http://odahub.io/ontology@g' >> ontology/ontology-platforms.ttl
python -c 'import rdflib; print("valid ontology with entries:", len(rdflib.Graph().load(open("ontology/ontology.ttl"), format="turtle")))'
python -c 'import rdflib; print("valid ontology with entries:", len(rdflib.Graph().load(open("ontology/#ontology-platforms.ttl"), format="turtle")))'


ontology: ontology/ontology.ttl
#ontology: ontology/ontology.ttl
ontology:
TDIR=$$(mktemp -d --suffix widoco) && cd $$TDIR && \
wget -c -O /tmp/widoco.jar https://github.com/dgarijo/Widoco/releases/download/v1.4.17/java-17-widoco-1.4.17-jar-with-dependencies.jar; \
java -jar /tmp/widoco.jar \
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165 changes: 111 additions & 54 deletions content/docs/guide-development.md

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2 changes: 1 addition & 1 deletion ontology
Submodule ontology updated 3 files
+7 −6 README.md
+1,029 −0 ontology-platforms.ttl
+842 −154 ontology.ttl