Dev wd (#191)

maxplanck-ie · Jul 19, 2024 · 8aa9d2e · 8aa9d2e
2 parents 75f002c + b685387
commit 8aa9d2e
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Showing 23 changed files with 1,316 additions and 2,114 deletions.
diff --git a/.flake8 b/.flake8
diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml
@@ -14,7 +14,7 @@ jobs:
   build:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: mamba-org/setup-micromamba@main
         with:
           environment-file: env.yml

diff --git a/.github/workflows/flake.yml b/.github/workflows/flake.yml
diff --git a/.github/workflows/lint.yml b/.github/workflows/lint.yml
@@ -0,0 +1,8 @@
+name: Ruff
+on: [push, pull_request]
+jobs:
+  ruff:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: chartboost/ruff-action@v1
diff --git a/.github/workflows/pytest.yml b/.github/workflows/pytest.yml
@@ -16,7 +16,7 @@ jobs:
   build:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: mamba-org/setup-micromamba@main
         with:
           environment-file: env.yml
@@ -25,7 +25,7 @@ jobs:
       - name: build
         run: |
           micromamba activate dissectBCL
-          pip install ./
+          pip install .[dev]
       - name: pytest
         run: |
           micromamba activate dissectBCL

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -1,6 +1,5 @@
 repos:
--   repo: "https://github.com/pycqa/flake8"
-    rev: "6.0.0"
-    hooks:
-    -   id: flake8
-        exclude: ^(build|docs|tests)
+- repo: https://github.com/astral-sh/ruff-pre-commit
+  rev: v0.5.2
+  hooks:
+    - id: ruff
diff --git a/AUTHORS b/AUTHORS