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Bug fix: fix bed start and end in bigwig_outlier_bed #6312
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chr1 0 10 100 100 + chr1 20 30 100 100 + chr1 40 50 100 100 + chr1 60 70 100 100 + chr1 200 300 100 100 + chr1 300 400 0 0 + chr1 400 1000 100 100 +
@bernt-matthias: thanks for the suggestions. Makes the tests outputs more informative... The new
The score doesn't affect anything in the conversion so the last 700nt are all considered a single segment.
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note the odd offsets. caused me some grief.
ok, restored some of the old histograms and long beds @bernt-matthias. |
…or large bed texts.
@bernt-matthias: is this ok now? |
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Thanks @fubar2!
Will wait for @bernt-matthias as well before merging.
Thanks a lot. |
@bernt-matthias - thank you! Thoughtful and constructive suggestions much appreciated... |
Fix bed coordinates and reran tests with new synthetic test bigwig
The test bed outputs now show correct start and half-open end positions for minwin of 10
New test data - a small bed converted to bigwig