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Bux Fix for Metaphlan3 : Renamed --unknown-estimation parameter to --unclassified-estimation #5979

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merged 2 commits into from
Apr 30, 2024

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SaimMomin12
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FOR CONTRIBUTOR:

  • I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
  • License permits unrestricted use (educational + commercial)
  • This PR adds a new tool or tool collection
  • This PR updates an existing tool or tool collection
  • This PR does something else (explain below)

Hi,

This PR fixes the #5958 reported at https://help.galaxyproject.org/t/metaphlan-issue-with-unknown-estimation-parameter/12157

The reported bug in the tool wrapper was due to an old parameter name --unknown_estimation that was renamed to --unclassified_estimation since version 4.0.0.

CHANGELOG Reference: https://github.com/biobakery/MetaPhlAn/blob/3080d946db5bbe0dafaf05de91dbd38e4d0e6e22/CHANGELOG.md?plain=1#L125

Cheers,
Saim

@SaimMomin12 SaimMomin12 requested a review from bgruening April 30, 2024 08:46
@bgruening bgruening merged commit b8bc892 into galaxyproject:main Apr 30, 2024
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2 participants