Updated stringtie merge test data

galaxyproject · May 13, 2024 · e2b7ca3 · e2b7ca3
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diff --git a/tools/stringtie/test-data/stringtie_merge_out1.gtf b/tools/stringtie/test-data/stringtie_merge_out1.gtf
@@ -1,5 +1,5 @@
-# stringtie --merge -p 1 -G /tmp/tmpr8yl388j/files/d/8/3/dataset_d8325888-f757-4336-9e42-1101c6ec296d.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpr8yl388j/job_working_directory/000/6/outputs/dataset_51c0f399-1d26-44c7-a4fd-e6f8897fe843.dat /tmp/tmpr8yl388j/files/5/5/b/dataset_55be25a6-c7f0-474e-a011-bb4cd427cfa2.dat /tmp/tmpr8yl388j/files/b/2/e/dataset_b2ef2a9d-3640-4858-8424-b4a29c57164d.dat /tmp/tmpr8yl388j/files/d/9/b/dataset_d9be016a-da47-4ad1-89bd-e9781f2751db.dat /tmp/tmpr8yl388j/files/b/e/f/dataset_befee6d4-95fb-4ee9-83a4-9b1302e6a21a.dat
-# StringTie version 2.2.2
+# stringtie --merge -p 1 -G /tmp/tmpapg328z2/files/2/f/f/dataset_2ff25b99-2996-4dec-83a0-d6c51a43761b.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpapg328z2/job_working_directory/000/6/outputs/dataset_edbe5c52-579b-47c1-b320-ba0bc8412b28.dat /tmp/tmpapg328z2/files/8/8/b/dataset_88be1713-81b3-46bd-ba7f-fa6cc8afca2d.dat /tmp/tmpapg328z2/files/b/c/d/dataset_bcd50081-e47a-48e9-ad3b-772cb04956b4.dat /tmp/tmpapg328z2/files/4/f/b/dataset_4fbad666-bf26-4724-92da-1b19fe88ba76.dat /tmp/tmpapg328z2/files/1/e/a/dataset_1ea206fb-8397-4b1d-9930-3341d6597970.dat
+# StringTie version 2.2.3
 test_chromosome	StringTie	transcript	53	550	1000	+	.	gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; ref_gene_id "CUFF.1"; 
 test_chromosome	StringTie	exon	53	250	1000	+	.	gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; exon_number "1"; ref_gene_id "CUFF.1"; 
 test_chromosome	StringTie	exon	351	400	1000	+	.	gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; exon_number "2"; ref_gene_id "CUFF.1"; 

diff --git a/tools/stringtie/test-data/stringtie_merge_out2.gtf b/tools/stringtie/test-data/stringtie_merge_out2.gtf
@@ -1,5 +1,5 @@
-# stringtie --merge -p 1 -G /tmp/tmpr8yl388j/files/9/2/b/dataset_92bbbdee-6cfa-4cff-bab3-0d0836475341.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpr8yl388j/job_working_directory/000/10/outputs/dataset_81bd1351-3b74-4332-b789-a4f53357a8fa.dat /tmp/tmpr8yl388j/files/3/c/3/dataset_3c3b1fdc-0351-48ef-a6eb-6c226751f619.dat /tmp/tmpr8yl388j/files/2/a/4/dataset_2a44d87f-131b-4587-bf25-2527d7d89964.dat
-# StringTie version 2.2.2
+# stringtie --merge -p 1 -G /tmp/tmpapg328z2/files/e/5/c/dataset_e5cafc26-99e9-441e-b6d7-6732d4e8ff0c.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpapg328z2/job_working_directory/000/10/outputs/dataset_c4d4110e-aa10-4a05-9ce8-bd76d91507a8.dat /tmp/tmpapg328z2/files/1/0/b/dataset_10b29ded-6b7b-45d4-8138-0ee6ebcbe3be.dat /tmp/tmpapg328z2/files/0/e/f/dataset_0efcd212-8978-444b-b29a-8818bb24f977.dat
+# StringTie version 2.2.3
 chr1	StringTie	transcript	3189811	3193042	1000	.	.	gene_id "MSTRG.1"; transcript_id "MSTRG.1.1"; 
 chr1	StringTie	exon	3189811	3193042	1000	.	.	gene_id "MSTRG.1"; transcript_id "MSTRG.1.1"; exon_number "1"; 
 chr1	StringTie	transcript	3200023	3200191	1000	.	.	gene_id "MSTRG.2"; transcript_id "MSTRG.2.1";