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IWC showcase #562

Merged
merged 74 commits into from
Oct 11, 2024
Merged

IWC showcase #562

merged 74 commits into from
Oct 11, 2024

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dannon
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@dannon dannon commented Oct 11, 2024

Very much still a work in progress but we want to go ahead and get this publishing for integrations w/ other servers and to collect any feedback and start polishing.

image

https://galaxyproject.github.io/iwc/

dannon added 30 commits October 10, 2024 10:08
@dannon
Basic dockstore manifest creation
a644f89
@dannon
Minor clarifications, refactoring
faa95aa
@dannon
include readme contents
264337a
@dannon
Regenerate manifest, formatting
493a372
@dannon
Basic manifest for tinkering
dcceeff
@dannon
basic astro
a47187d
@dannon
Incremental work, rebase flat
e32cbfc
@dannon
More data loading
4f20bc4
@dannon
Show description on listing, fix title
87fda6b
@dannon
Add astro/tailwind
7ef9699
@dannon
Basic astro working, try nuxt now
59f3a55
@dannon
Stage to astro
8f4553d
@dannon
Init nuxt
ddafa84
@dannon
nuxtui
8d1c8ec
@dannon
Basic nuxt version
bfcb380
@dannon
Astro lock
b4d79f3
@dannon
Regnerate workflow_manifest.
fe5a861 
Note:

No README.md at ./workflows/VGP-assembly-v2/Assembly-decontamination-VGP9/README.md
No README.md at ./workflows/VGP-assembly-v2/Mitogenome-assembly-VGP0/README.md
No CHANGELOG.md at ./workflows/VGP-assembly-v2/Mitogenome-assembly-VGP0/CHANGELOG.md

Check organization of vgp-assembly-v2
@dannon
Drop astro
1ca1e43
@dannon
Incremental work adding typing for workflow manifest
bea16af
@dannon
relocate showcase_nuxt, leaving astro behind
1d37c00
@dannon
Simpler styling for card outline
202c933
@dannon
Tweak theme to 'cool'
c12adac
@dannon
Adjust workflowList to have a searchable list on the left, display on…
d0d298a 
… the right
@dannon
Show all workflows, fast-filtering. Click to scroll-to.
51edb06
@dannon
Fix individiual page access.
b90d7d9
@dannon
Adjust list display
c194a44
@dannon
More fields declared in workflow model
cfd2d5e
@dannon
Workflow detail display
d23faa8
@dannon
Add marked for markdown processing, handling of README/CHANGELOG
8bc716e
@dannon
use marked, parse markdown, render readme/changelog
efca5af
dannon and others added 23 commits October 10, 2024 10:08
@dannon
Add placeholder for 'tools used in workflow'
0c9ce65
@dannon
temporary logo...
d4b7e95
@dannon
Placeholders for about/docs/help
f5eb5ab
@dannon
Add tags display to main list -- eventually searchable, filterable
ee824e2
@dannon
Add basic author component linking to orcid when available
7cdab24
@dannon
Apply some suggested tab name tweaks, less technical
a9c73a8
@dannon
Add iwc logo static file
1e090d1
@dannon
Header tweaks, use logo -- not sure if it's bold enough?
ca90682
@dannon
format.
d79acd5
@dannon
Quick hack instance selector
8bfafef
@mvdbeek @dannon
WIP: create workflow landing page with test parameters
1176edf
@mvdbeek @dannon
Use selected instance in workflow landing request
68d31a1
@dannon
Add gh-pages publishing workflow
6b3c86d
@dannon
Drop workflow manifest
23d58ac
@dannon
Ignore workflow manifest
98e6fd5
@dannon
Fix SSR generation of target urls -- this can be unset
c145cb7
@dannon
Fix 'about' page not found by dumping it for now -- todo: content
83b219f
@dannon
Use https for usegalaxy.org
0e2d82a
@dannon
Fix publishing location
5f72a08
@dannon
Attempt to fix manifest generation
d46ae8f
@dannon
Fix action to use correct name for manifest generation script... face…
7079f73 
…palm.
@dannon
fix app base url for github page deploy
a78c1bb
@dannon
Swap to building off main branch in action
6acc2f4
@dannon dannon requested a review from mvdbeek October 11, 2024 13:14
@mvdbeek mvdbeek merged commit acb8838 into main Oct 11, 2024
2 checks passed
@mvdbeek mvdbeek deleted the website branch October 11, 2024 13:27
@mvdbeek
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mvdbeek commented Oct 11, 2024

Attention: deployment skipped!

https://github.com/galaxyproject/iwc/actions/runs/11293246088

@lldelisle
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This is already super cool.
Do you think you could do something like GTN is doing:
https://training.galaxyproject.org/training-material/topics/single-cell/tutorials/scatac-preprocessing-tenx/tutorial.html#admin-missing-tools
Where the tool_panel_section_label is based on usegalaxy.eu/org/au

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@mvdbeek mvdbeek Awaiting requested review from mvdbeek

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3 participants
@dannon @mvdbeek @lldelisle