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Update both rnaseq #211

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merged 27 commits into from
Sep 15, 2023
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3f234ae
Updating workflows/transcriptomics/rnaseq-pe from 0.4 to 0.5
Mar 17, 2023
20a4e0a
Updating workflows/transcriptomics/rnaseq-sr from 0.4 to 0.5
Mar 17, 2023
7840e21
Updating workflows/transcriptomics/rnaseq-pe from 0.5 to 0.6
Apr 17, 2023
272dae8
Updating workflows/transcriptomics/rnaseq-sr from 0.5 to 0.6
Apr 17, 2023
18798b3
Updating workflows/transcriptomics/rnaseq-pe from 0.6 to 0.7
Jun 17, 2023
10a4df4
Updating workflows/transcriptomics/rnaseq-sr from 0.6 to 0.7
Jun 17, 2023
9ab9fa4
update dockstore
lldelisle Aug 30, 2023
1a8ee07
synchronize version and changelog
lldelisle Aug 30, 2023
3a68d54
try to update workflow
lldelisle Aug 30, 2023
a88b3ee
Merge remote-tracking branch 'upstream/main' into workflows/transcrip…
lldelisle Sep 1, 2023
1cf96a6
update test for stringtie
lldelisle Sep 1, 2023
3062747
Merge branch 'workflows/transcriptomics/rnaseq-sr' of github.com:plan…
lldelisle Sep 1, 2023
35e0856
update workflow and tests
lldelisle Sep 4, 2023
bc0d9fc
update STAR, add subworkflow to compute both strands coverage
lldelisle Sep 11, 2023
85c0caf
update changelog and tests
lldelisle Sep 11, 2023
81ef815
Update README
lldelisle Sep 11, 2023
a114979
update workflow
lldelisle Sep 11, 2023
1ce395a
update README tests etc...
lldelisle Sep 11, 2023
f91afa6
update test results
lldelisle Sep 11, 2023
5141c08
use regex on tests
lldelisle Sep 12, 2023
21c2645
fix spelling
lldelisle Sep 12, 2023
3457a62
check spelling
lldelisle Sep 12, 2023
d12c5ed
Merge branch 'main' into workflows/transcriptomics/rnaseq-pe
lldelisle Sep 14, 2023
0e6c447
fix tests
lldelisle Sep 14, 2023
34eb854
Merge branch 'main' into workflows/transcriptomics/rnaseq-sr
lldelisle Sep 15, 2023
4b8a94c
Merge remote-tracking branch 'autoupdate/workflows/transcriptomics/rn…
lldelisle Sep 15, 2023
c159c3d
Language editing
lldelisle Sep 15, 2023
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