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update test for stringtie
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lldelisle committed Sep 1, 2023
1 parent 3a68d54 commit 1cf96a6
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6 changes: 6 additions & 0 deletions workflows/transcriptomics/rnaseq-sr/rnaseq-sr-tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -87,6 +87,12 @@
asserts:
has_text:
text: "FBgn0031217\t-\t-\tFBgn0031217\tCG11377\t-\tchr2L:102379-104142\t-\t-\t32.1015\t22.1771\t42.0259\tOK"
genes_expression_stringtie:
element_tests:
GSM461177:
asserts:
has_text:
text: "FBgn0031217 CG11377 chr2L + 102380 104142 1.003790 31.826454 55.206604"
both strands coverage:
element_tests:
GSM461177:
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