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Fix commas that shouldn't be in biotools_mappings.tsv #18919

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merged 3 commits into from
Oct 4, 2024
Merged

Fix commas that shouldn't be in biotools_mappings.tsv #18919

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9c3137c
Fix commas that shouldn't be in biotools_mappings.tsv
jmchilton Oct 1, 2024
beb4842
Allow multiple xrefs in biotools_mappings.tsv.
jmchilton Oct 2, 2024
24152ac
Fix another biotools entry.
jmchilton Oct 2, 2024
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36 changes: 18 additions & 18 deletions lib/galaxy/tool_util/ontologies/biotools_mappings.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -965,23 +965,23 @@ stacks2_tsv2bam stacks
stacks2_sstacks stacks
BayeScan bayescan
stacks2_cstacks stacks
NSPDK_candidateClust graphclust, GraphClust2
structure_to_gspan graphclust, GraphClust2
preproc graphclust, GraphClust3
preMloc graphclust, GraphClust4
nspdk_sparse graphclust, GraphClust5
locarna_best_subtree graphclust, GraphClust6
gspan graphclust, GraphClust7
glob_report graphclust, GraphClust8
cmFinder graphclust, GraphClust9
graphclust_align_cluster graphclust, GraphClust10
graphclust_aggregate_alignments graphclust, GraphClust11
graphclust_glob_report_no_align graphclust, GraphClust12
motifFinderPlot graphclust, GraphClust13
NSPDK_candidateClust graphclust
structure_to_gspan graphclust
preproc graphclust
preMloc graphclust
nspdk_sparse graphclust
locarna_best_subtree graphclust
gspan graphclust
glob_report graphclust
cmFinder graphclust
graphclust_align_cluster graphclust
graphclust_aggregate_alignments graphclust
graphclust_glob_report_no_align graphclust
motifFinderPlot graphclust
infernal_cmbuild infernal
infernal_cmsearch infernal
infernal_cmstat infernal
customize_metaphlan_database metaphlan, seqtk
customize_metaphlan_database metaphlan
merge_metaphlan_tables metaphlan
metabat2_jgi_summarize_bam_contig_depths MetaBAT_2
est_abundance bracken
Expand Down Expand Up @@ -1898,10 +1898,10 @@ gatk_count_covariates gatk
spring_model spring
spring_minz spring
spring_cross spring
pubmed_by_queries pubmed, simtext
text_to_wordmatrix pubmed, simtext
abstracts_by_pmids pubmed, simtext
pmids_to_pubtator_matrix pubmed, simtext
pubmed_by_queries pubmed
text_to_wordmatrix pubmed
abstracts_by_pmids pubmed
pmids_to_pubtator_matrix pubmed
spring_model_all spring
spring_map spring
spring_mcc spring
Expand Down
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