v0.3.5

What's Changed

• Add support for python 3.13 by @csoneson in #25
• Add support for single-channel image plotting using selected colormaps, e.g. img.plot(channels=[0], channel_colors=['viridis'])

Full Changelog: v0.3.4...v0.3.5

v0.3.4

What's Changed

• add conda installation instructions
• search also higher resolution pyramid levels if label_value is not found on the lower-resolution label
• fix use of constant_value in plotting.pad_image
• add image_transform, title_fontsize and scalebar_fontsize arguments to plotting.plot_image (and therefore also to Image.plot and ImageList.plot)

Full Changelog: v0.3.3...v0.3.4

v0.3.3

What's Changed

• add reference to ezzarr
• use lowest resolution pyramid level to get bounding box for label_value (may lead to significant speed-ups)
• raise exception if label_value does not exist in get_bounding_box_for_label_value

Full Changelog: v0.3.2...v0.3.3

v0.3.2

What's Changed

• Remove create_name_plate_A1 (always use create_name_plate_A01 for empty wells)
• get names from .zattr for non-empty wells

Full Changelog: v0.3.1...v0.3.2

v0.3.0

What's Changed

• allow a list of label_name's in get_array_pair_by_coordinate
• allow getting also highest-resolution pyramid level with _digest_pyramid_level
• enhance get_bounding_box_for_label_value to also convert coordinates to a selected output space

Full Changelog: v0.2.3...v0.3.0

v0.2.3

What's Changed

• Sort layout and img_paths jointly by @csoneson in #13

Full Changelog: v0.2.2...v0.2.3

v0.2.2

What's new

• Add ome_zarr.ImageList class to represent a set of ome_zarr.Image objects
• Add ome_zarr.import_Fractal_plate helper function that creates an ome_zarr.ImageList from a Fractal output with fully configured plate layout
• Minor fixes and improvements

Full Changelog: v0.2.1...v0.2.2

v0.2.1

What's new

• minor fixes
• add plotting.plot_image(..., restrict_to_label_values) argument, allowing to mask out regions outside of the selected label

Full Changelog: v0.2.0...v0.2.1

v0.2.0

What's new

Much of the issues described in #9, including:

• move some helper functions to new module utils
• create new module ome_zarr
• add new class ome_zarr.Image to represent a single image
  (implements most of the well-level functionality in hcs_wrappers.plate,
  and in addition adds a few new tricks, like automated scaling of intensity
  and label arrays)
• mark hcs_wrappers classes as "legacy" in the documentation

Full Changelog: v0.1.5...v0.2.0

v0.1.5

What's Changed

• add pyramid_level_coord argument to plot_well() by @silvbarb in #5
• add scalebar_label argument to plot_well() and plot_image()
• update quickstart.qmd to use the new plotting features

Full Changelog: v0.1.4...v0.1.5