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protein-translation: Add canonical data. (#997)
* Add protein translation canonical data as per #577. * Update properties to reflect different return types. * Update to test only one property, and fix formatting. * Update test description for clarity. * Reduced length of test descriptions. * Update tests including 'STOP' codons for consistency. * Update 'STOP' test description * Update 'STOP' codon tests to expect an empty list. * Rename 'property', add a larger range of STOP codon tests, rearrange existing stop codon tests, remove testing for invalid data.
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{ | ||
"exercise": "protein-translation", | ||
"version": "1.0.0", | ||
"cases": [ | ||
{ | ||
"description": "Translate input RNA sequences into proteins", | ||
"comments": [ | ||
"Returns the name of the protein if given RNA is valid, " | ||
, "else throws an error. " | ||
], | ||
"cases": [ | ||
{ | ||
"description": "Methionine RNA sequence", | ||
"property": "proteins", | ||
"strand": "AUG", | ||
"expected": ["Methionine"] | ||
}, | ||
{ | ||
"description": "Phenylalanine RNA sequence 1", | ||
"property": "proteins", | ||
"strand": "UUU", | ||
"expected": ["Phenylalanine"] | ||
}, | ||
{ | ||
"description": "Phenylalanine RNA sequence 2", | ||
"property": "proteins", | ||
"strand": "UUC", | ||
"expected": ["Phenylalanine"] | ||
}, | ||
{ | ||
"description": "Leucine RNA sequence 1", | ||
"property": "proteins", | ||
"strand": "UUA", | ||
"expected": ["Leucine"] | ||
}, | ||
{ | ||
"description": "Leucine RNA sequence 2", | ||
"property": "proteins", | ||
"strand": "UUG", | ||
"expected": ["Leucine"] | ||
}, | ||
{ | ||
"description": "Serine RNA sequence 1", | ||
"property": "proteins", | ||
"strand": "UCU", | ||
"expected": ["Serine"] | ||
}, | ||
{ | ||
"description": "Serine RNA sequence 2", | ||
"property": "proteins", | ||
"strand": "UCC", | ||
"expected": ["Serine"] | ||
}, | ||
{ | ||
"description": "Serine RNA sequence 3", | ||
"property": "proteins", | ||
"strand": "UCA", | ||
"expected": ["Serine"] | ||
}, | ||
{ | ||
"description": "Serine RNA sequence 4", | ||
"property": "proteins", | ||
"strand": "UCG", | ||
"expected": ["Serine"] | ||
}, | ||
{ | ||
"description": "Tyrosine RNA sequence 1", | ||
"property": "proteins", | ||
"strand": "UAU", | ||
"expected": ["Tyrosine"] | ||
}, | ||
{ | ||
"description": "Tyrosine RNA sequence 2", | ||
"property": "proteins", | ||
"strand": "UAC", | ||
"expected": ["Tyrosine"] | ||
}, | ||
{ | ||
"description": "Cysteine RNA sequence 1", | ||
"property": "proteins", | ||
"strand": "UGU", | ||
"expected": ["Cysteine"] | ||
}, | ||
{ | ||
"description": "Cysteine RNA sequence 2", | ||
"property": "proteins", | ||
"strand": "UGC", | ||
"expected": ["Cysteine"] | ||
}, | ||
{ | ||
"description": "Tryptophan RNA sequence", | ||
"property": "proteins", | ||
"strand": "UGG", | ||
"expected": ["Tryptophan"] | ||
}, | ||
{ | ||
"description": "STOP codon RNA sequence 1", | ||
"property": "proteins", | ||
"strand": "UAA", | ||
"expected": [] | ||
}, | ||
{ | ||
"description": "STOP codon RNA sequence 2", | ||
"property": "proteins", | ||
"strand": "UAG", | ||
"expected": [] | ||
}, | ||
{ | ||
"description": "STOP codon RNA sequence 3", | ||
"property": "proteins", | ||
"strand": "UGA", | ||
"expected": [] | ||
}, | ||
{ | ||
"description": "Translate RNA strand into correct protein list", | ||
"property": "proteins", | ||
"strand": "AUGUUUUGG", | ||
"expected": ["Methionine","Phenylalanine","Tryptophan"] | ||
}, | ||
{ | ||
"description": "Translation stops if STOP codon at beginning of sequence", | ||
"property": "proteins", | ||
"strand": "UAGUGG", | ||
"expected": [] | ||
}, | ||
{ | ||
"description": "Translation stops if STOP codon at end of two-codon sequence", | ||
"property": "proteins", | ||
"strand": "UGGUAG", | ||
"expected": ["Tryptophan"] | ||
}, | ||
{ | ||
"description": "Translation stops if STOP codon at end of three-codon sequence", | ||
"property": "proteins", | ||
"strand": "AUGUUUUAA", | ||
"expected": ["Methionine","Phenylalanine"] | ||
}, | ||
{ | ||
"description": "Translation stops if STOP codon in middle of sequence of three-codon sequence", | ||
"property": "proteins", | ||
"strand": "UGGUAGUGG", | ||
"expected": ["Tryptophan"] | ||
}, | ||
{ | ||
"description": "Translation stops if codon in middle of sequence of six-codon sequence", | ||
"property": "proteins", | ||
"strand": "UGGUGUUAUUAAUGGUUU", | ||
"expected": ["Tryptophan","Cysteine","Tyrosine"] | ||
} | ||
] | ||
} | ||
] | ||
} |