Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR updates the {superspreading} package to use the latest function and class names from the {epiparameter} package (a suggested dependency of {superspreading}).
Since epiverse-trace/epiparameter#360 the
<epidist>
class was renamed<epiparameter>
(see epiverse-trace/epiparameter#325). This came with functions that used the previous naming being removed, andepidist_db()
became deprecated and replaced byepiparameter_db()
.This PR replaces the use of
epidist_db()
withepiparameter_db()
, renamesget_epidist_params()
toget_epiparameter_params()
and replaces assertions that check the class from<epidist>
to<epiparameter>
. Error messages are updated, as is function documentation.This is not a breaking change to {superspreading} as only internal functions are renamed or have arguments changed, and error messages are the only user-facing change. The vignettes are updated to call
epiparameter_db()
.