v0.0.7

Fixed an issue in monocle_create(), addressing ebi-gene-expression-group/container-galaxy-sc-tertiary#124.

v0.0.6

• Deal with potential lack of headers in cell/ gene annotations #8

v0.0.5

Fixed an issue where csv, tsv input matrix were not handled correctly. (ebi-gene-expression-group/container-galaxy-sc-tertiary#119)

v0.0.4

Add ability to parse expression matrices in .mtx format when building a CDS object.

v0.0.3

Bump version to 0.0.3

v0.0.2

Update to monocle 3 beta

Initial release

Squashed commit of the following:

commit d5b03d73ece1b7e0c3785ae9ee860bec1e428ac0
Author: nh3 <[email protected]>
Date:   Fri Apr 5 11:27:43 2019 +0100

    Remove installed test package to save cache-rebuild each time

commit 7b698c0c906e0b8e1ea02f8e982b56cdee7e71f8
Author: nh3 <[email protected]>
Date:   Fri Apr 5 11:25:33 2019 +0100

    Fix a bug where subcommand args were not extracted

commit 534c3d9787b225b7c89d8030787fe4c379416dc2
Author: nh3 <[email protected]>
Date:   Fri Apr 5 11:24:17 2019 +0100

    Fix typo

commit 0fd65ecada01784b168ceebcfcdf895a93516a3f
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:57:34 2019 +0100

    Update travis

commit 8dc4835f7fa07cb83582001246e39d708b812f62
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:45:23 2019 +0100

    Add wrapper script

commit 4d771a7b90b3628069d8d8147be429677042ea54
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:44:59 2019 +0100

    Add helper functions for wrapper methods

commit 1c2f041e28a89fe9c058d46ecdbfc0eb63791216
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:44:38 2019 +0100

    Add wrapper methods called by wrapper script

commit 9ea680496cd090310c4474bb72f5615e7e80683c
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:43:29 2019 +0100

    Add functions providing command line options for monocle3

commit e3944f1fe8fbfe33ae9e9eca73bc3faca3162fd4
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:41:52 2019 +0100

    Add helper functions that extend r-optparse

commit 8a3616e13abb2a8c811521c050fe9f1ba07dbf06
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:20:04 2019 +0100

    Add tests for each sub-command

commit defa32962320867269ed24755d24d5a3bfefdc87
Author: nh3 <[email protected]>
Date:   Fri Apr 5 10:19:11 2019 +0100

    Update README

commit 728be8defeb16a9b1121a27c71b7e296e7c041e4
Author: nh3 <[email protected]>
Date:   Thu Apr 4 22:27:28 2019 +0100

    Update README

commit dec9cfcadc0c78337b1afea33c713c4b1c1a3468
Author: nh3 <[email protected]>
Date:   Thu Apr 4 17:46:50 2019 +0100

    Add DESCRIPTION