Modifying files for installation on WCOSS2 with python3.10, including…

… generic change to compilation script (#2444)

internal/scripts/installation/compile_MET_all.sh

@@ -832,9 +832,9 @@ if [ $COMPILE_MET -eq 1 ]; then
   # https://www.gnu.org/software/bash/manual/html_node/Shell-Parameter-Expansion.html
   # ${parameter:+word}
   # If parameter is null or unset, nothing is substituted, otherwise the expansion of word is substituted.
-  export LDFLAGS="${LDFLAGS} -Wl,-rpath,${LIB_DIR}/lib${MET_NETCDF:+:$MET_NETCDF/lib}${MET_HDF5:+:$MET_HDF5/lib}${MET_BUFRLIB:+:$MET_BUFRLIB}${MET_GRIB2CLIB:+:$MET_GRIB2CLIB}${MET_PYTHON:+:$MET_PYTHON/lib}${MET_GSL:+:$MET_GSL/lib}"
+  export LDFLAGS="${LDFLAGS} -Wl,-rpath,${LIB_DIR}/lib${ADDTL_DIR:+:$ADDTL_DIR}${MET_NETCDF:+:$MET_NETCDF/lib}${MET_HDF5:+:$MET_HDF5/lib}${MET_BUFRLIB:+:$MET_BUFRLIB}${MET_GRIB2CLIB:+:$MET_GRIB2CLIB}${MET_PYTHON:+:$MET_PYTHON/lib}${MET_GSL:+:$MET_GSL/lib}"
   export LDFLAGS="${LDFLAGS} -Wl,-rpath,${LIB_JASPER:+$LIB_JASPER}${LIB_LIBPNG:+:$LIB_PNG}${LIB_Z:+$LIB_Z}"
-  export LDFLAGS="${LDFLAGS} ${LIB_JASPER:+-L$LIB_JASPER} ${LIB_LIBPNG:+-L$LIB_LIBPNG} ${MET_HDF5:+-L$MET_HDF5/lib}"
+  export LDFLAGS="${LDFLAGS} ${LIB_JASPER:+-L$LIB_JASPER} ${LIB_LIBPNG:+-L$LIB_LIBPNG} ${MET_HDF5:+-L$MET_HDF5/lib} ${ADDTL_DIR:+-L$ADDTL_DIR}"
   export LIBS="${LIBS} -lhdf5_hl -lhdf5 -lz"
   export MET_FONT_DIR=${TEST_BASE}/fonts
 

internal/scripts/installation/config/install_met_env.acorn_py3.10

@@ -0,0 +1,36 @@
+module use /apps/ops/para/libs/modulefiles/compiler/intel/19.1.3.304/
+module load intel python/3.10.4
+module load ve/evs/1.0
+module load netcdf/4.7.4
+module load hdf5/1.12.2
+module load bufr/11.5.0
+module load zlib/1.2.11
+module load jasper/2.0.25
+module load libpng/1.6.37
+module load gsl/2.7
+module load g2c/1.6.4
+
+export TEST_BASE=/apps/sw_review/emc/MET/11.0.1
+export LIB_DIR=${TEST_BASE}/external_libs
+export BIN_DIR_PATH=${TEST_BASE}/exec
+export COMPILER=intel_19.1.3.304
+export MET_SUBDIR=${TEST_BASE}
+export MET_TARBALL=v11.0.1.tar.gz
+export USE_MODULES=TRUE
+export ADDTL_DIR=/apps/spack/gettext/0.21/intel/19.1.3.304/at2kdo4edvuhyzrt5g6zhwrdb7bdui4s/lib64
+export PYTHON_MODULE=python_3.10.4
+export MET_PYTHON=/apps/spack/python/3.10.4/intel/19.1.3.304/xqft4d45h4dp4xnbz2ue3nbxv65i6bgp
+export MET_PYTHON_CC=-I/apps/spack/python/3.10.4/intel/19.1.3.304/xqft4d45h4dp4xnbz2ue3nbxv65i6bgp/include/python3.10
+export MET_PYTHON_LD=-L/apps/spack/python/3.10.4/intel/19.1.3.304/xqft4d45h4dp4xnbz2ue3nbxv65i6bgp/lib/python3.10/config-3.10-x86_64-linux-gnu/\ -L/apps/spack/python/3.10.4/intel/19.1.3.304/xqft4d45h4dp4xnbz2ue3nbxv65i6bgp/lib64\ -lpython3.10\ -lintl\ -lcrypt\ -ldl\ -lutil\ -lm\ -lm
+export MET_NETCDF=/apps/prod/hpc-stack/intel-19.1.3.304/netcdf/4.7.4
+export MET_HDF5=/apps/prod/hpc-stack/intel-19.1.3.304/hdf5/1.12.2
+export MET_BUFRLIB=/apps/ops/prod/libs/intel/19.1.3.304/bufr/11.5.0/lib64
+export MET_GRIB2CLIB=/apps/ops/prod/libs/intel/19.1.3.304/g2c/1.6.4/lib64
+export MET_GRIB2CINC=/apps/ops/prod/libs/intel/19.1.3.304/g2c/1.6.4/include
+export MET_GSL=/apps/spack/gsl/2.7/intel/19.1.3.304/xks7dxbowrdxhjck5zxc4rompopocevb
+export BUFRLIB_NAME=-lbufr_4
+export GRIB2CLIB_NAME=-lg2c
+export LIB_JASPER=/apps/spack/jasper/2.0.25/intel/19.1.3.304/sjib74krrorkyczqpqah4tvewmlnqdx4/lib64
+export LIB_LIBPNG=/apps/spack/libpng/1.6.37/intel/19.1.3.304/4ohkronuhlyherusoszzrmur5ewvlwzh/lib
+export LIB_Z=/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib
+export SET_D64BIT=FALSE

internal/scripts/installation/config/install_met_env.wcoss2_py3.10

@@ -0,0 +1,47 @@
+# JY module use /apps/ops/para/libs/modulefiles/compiler/intel/19.1.3.304/
+module load intel
+# JY add following two
+module load craype/2.7.13
+module load cray-mpich/8.1.12
+
+module load python/3.10.4
+module load netcdf/4.7.4
+module load hdf5/1.10.6
+module load bufr/11.6.0
+module load zlib/1.2.11
+module load jasper/2.0.25
+module load libpng/1.6.37
+module load gsl/2.7
+module load g2c/1.6.4
+
+#export TEST_BASE=/apps/ops/para/libs/intel/19.1.3.304/met/11.0.1
+export TEST_BASE=$(pwd)
+export LIB_DIR=${TEST_BASE}/external_libs
+export BIN_DIR_PATH=${TEST_BASE}/bin
+export COMPILER=intel_19.1.3.304
+export MET_SUBDIR=${TEST_BASE}
+export MET_TARBALL=v11.0.1.tar.gz
+export USE_MODULES=TRUE
+export ADDTL_DIR=/apps/spack/gettext/0.21/intel/19.1.3.304/at2kdo4edvuhyzrt5g6zhwrdb7bdui4s/lib64
+export PYTHON_MODULE=python_3.10.4
+export MET_PYTHON=/apps/spack/python/3.10.4/intel/19.1.3.304/xqft4d45h4dp4xnbz2ue3nbxv65i6bgp
+export MET_PYTHON_CC=-I/apps/spack/python/3.10.4/intel/19.1.3.304/xqft4d45h4dp4xnbz2ue3nbxv65i6bgp/include/python3.10
+export MET_PYTHON_LD=-L/apps/spack/python/3.10.4/intel/19.1.3.304/xqft4d45h4dp4xnbz2ue3nbxv65i6bgp/lib\ -lpython3.10\ -lpthread\ -ldl\ -lutil\ -lm\ -Xlinker\ -export-dynamic
+export MET_NETCDF=/apps/prod/hpc-stack/intel-19.1.3.304/netcdf/4.7.4
+# JY export MET_HDF5=/apps/prod/hpc-stack/intel-19.1.3.304/hdf5/1.12.2
+export MET_HDF5=${HDF5_ROOT}
+export MET_BUFRLIB=/apps/ops/prod/libs/intel/19.1.3.304/bufr/11.6.0/lib64
+# JY export MET_GRIB2CLIB=/apps/ops/prod/libs/intel/19.1.3.304/g2c/1.6.4/lib64
+# JY export MET_GRIB2CINC=/apps/ops/prod/libs/intel/19.1.3.304/g2c/1.6.4/include
+export MET_GRIB2CLIB=${g2c_ROOT}/lib64
+export MET_GRIB2CINC=${G2C_INC}
+export MET_GSL=/apps/spack/gsl/2.7/intel/19.1.3.304/xks7dxbowrdxhjck5zxc4rompopocevb
+export BUFRLIB_NAME=-lbufr_4
+export GRIB2CLIB_NAME=-lg2c
+# JY export LIB_JASPER=/apps/spack/jasper/2.0.25/intel/19.1.3.304/sjib74krrorkyczqpqah4tvewmlnqdx4/lib64
+export LIB_JASPER=${JASPER_LIBDIR}
+# JY export LIB_LIBPNG=/apps/spack/libpng/1.6.37/intel/19.1.3.304/4ohkronuhlyherusoszzrmur5ewvlwzh/lib
+export LIB_LIBPNG=${LIBPNG_LIBDIR}
+# JY export LIB_Z=/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib
+export LIB_Z=${ZLIB_LIBDIR}
+export SET_D64BIT=FALSE

internal/scripts/installation/modulefiles/11.0.1.lua.wcoss2

@@ -0,0 +1,27 @@
+help([[
+]])
+
+local pkgName    = myModuleName()
+local pkgVersion = myModuleVersion()
+local pkgNameVer = myModuleFullName()
+
+local hierA        = hierarchyA(pkgNameVer,1)
+local compNameVer  = hierA[1]
+
+
+conflict(pkgName)
+
+local opt = os.getenv("HPC_OPT") or os.getenv("OPT") or "/opt/modules"
+
+local base = pathJoin(opt,compNameVer,pkgName,pkgVersion)
+
+prepend_path("PATH", pathJoin(base,"bin"))
+
+setenv("MET_ROOT", base)
+setenv("MET_BASE", pathJoin(base, "share", "met"))
+setenv("MET_VERSION", pkgVersion)
+
+whatis("Name: ".. pkgName)
+whatis("Version: " .. pkgVersion)
+whatis("Category: applications")
+whatis("Description: Model Evaluation Tools (MET)")

internal/scripts/installation/modulefiles/11.0.1_acorn

@@ -0,0 +1,34 @@
+#%Module######################################################################
+##
+##      Model Evaluation Tools
+##
+proc ModulesHelp { } {
+  puts stderr "Sets up the paths and environment variables to use the Model Evaluation Tools v11.0.1
+     *** For help see the official MET webpage at http://www.dtcenter.org/met/users ***"
+}
+
+# The intel compiler is required to run MET
+
+module use /apps/ops/para/libs/modulefiles/compiler/intel/19.1.3.304/
+module load intel python/3.10.4
+module load ve/evs/1.0
+module load netcdf/4.7.4
+module load hdf5/1.12.2
+module load bufr/11.5.0
+module load zlib/1.2.11
+module load jasper/2.0.25
+module load libpng/1.6.37
+module load gsl/2.7
+module load g2c/1.6.4
+
+set base /apps/sw_review/emc/MET/11.0.1
+set ver  11.0.1
+set share $base/share/met
+set lib_base $base
+
+prepend-path PATH $base/exec
+
+setenv METversion V$ver
+setenv MET_ROOT $base
+
+