updating af_backprop version

colab_notebooks/quickdemo_wAF2.ipynb

@@ -343,7 +343,7 @@
         "  with io.capture_output() as captured:\n",
         "    # install ALPHAFOLD\n",
         "    if not os.path.isdir(\"af_backprop\"):\n",
-        "      %shell git clone -b beta https://github.com/sokrypton/af_backprop.git\n",
+        "      %shell git clone https://github.com/sokrypton/af_backprop.git\n",
         "      %shell pip -q install biopython dm-haiku ml-collections py3Dmol\n",
         "      %shell wget -qnc https://raw.githubusercontent.com/sokrypton/ColabFold/main/beta/colabfold.py\n",
         "    if not os.path.isdir(\"params\"):\n",
@@ -412,7 +412,7 @@
         "\n",
         "  # get params\n",
         "  model_param = data.get_model_haiku_params(model_name=\"model_3_ptm\", data_dir=\".\")\n",
-        "  model_runner = alphafold_model.RunModel(cfg, model_param, is_training=False)\n",
+        "  model_runner = alphafold_model.RunModel(cfg, model_param, is_training=False, recycle_mode=\"none\")\n",
         "\n",
         "  model_params = []\n",
         "  for k in [1,2,3,4,5]:\n",
@@ -606,4 +606,4 @@
   },
   "nbformat": 4,
   "nbformat_minor": 0
-}
+}