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Added new lineage FS.1 from #1816 with 111 new sequence designations, and 24 updated from CH.1.1.12 #1935

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merged 1 commit into from
Apr 21, 2023
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Added new lineage FS.1 from #1816 with 111 new sequence designations, and 24 updated from CH.1.1.12 #1935

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1 change: 1 addition & 0 deletions lineage_notes.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -876,6 +876,7 @@ CH.1.1.9 Alias of B.1.1.529.2.75.3.4.1.1.1.1.9, England, defined by S:I1232V
CH.1.1.10 Alias of B.1.1.529.2.75.3.4.1.1.1.1.10, Ireland, ORF1a:G442S
CH.1.1.11 Alias of B.1.1.529.2.75.3.4.1.1.1.1.11, ORF1a:A1176T
CH.1.1.12 Alias of B.1.1.529.2.75.3.4.1.1.1.1.12, S:L858I on ORF1a:A486V branch, Denmark
FS.1 Alias of B.1.1.529.2.75.3.4.1.1.1.1.12.1, found mainly in Denmark, from pango-designation issue #1816
CH.1.1.13 Alias of B.1.1.529.2.75.3.4.1.1.1.1.13, ORF3a:S171L
CH.1.1.14 Alias of B.1.1.529.2.75.3.4.1.1.1.1.14, N:T362I
CH.1.1.15 Alias of B.1.1.529.2.75.3.4.1.1.1.1.15, found mainly in Lithuania, Germany and UK, from pango-designation issue #1726
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1 change: 1 addition & 0 deletions pango_designation/alias_key.json
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Expand Up @@ -147,6 +147,7 @@
"FP": "XBB.1.11.1",
"FQ": "B.1.1.529.5.3.1.1.1.1.1.1.39",
"FR": "B.1.1.529.2.75.5.1.2.3",
"FS": "B.1.1.529.2.75.3.4.1.1.1.1.12",
"XA": ["B.1.1.7","B.1.177"],
"XB": ["B.1.634","B.1.631"],
"XC": ["AY.29","B.1.1.7"],
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