Skip to content

Navigation Menu

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

broadinstitute / viral-pipelines Public

Notifications You must be signed in to change notification settings
Fork 27
Star 62

Code
Issues 23
Pull requests 15
Discussions
Actions
Projects
Security
Insights

Additional navigation options

Code
Issues
Pull requests
Discussions
Actions
Projects
Security
Insights

lofreq task portability, misc other edits#426

Merged

dpark01 merged 8 commits intomasterbroadinstitute/viral-pipelines:masterfrom dp-cdcbroadinstitute/viral-pipelines:dp-cdcCopy head branch name to clipboard

Jun 9, 2022

+22-9

Conversation Commits8 (8)Checks Files changed

Commits

Commits on Jun 8, 2022

rename task package_genbank_ftp_submission to package_sc2_genbank_ftp_submission because NCBI does not yet permit this for everything
dpark01
committed
lofreq bugfix
dpark01
committed
Merge branch 'dp-cdc' of https://github.com/broadinstitute/viral-pipelines into dp-cdc
dpark01
committed
rename inputs
dpark01
committed
fix
dpark01
committed
fix again
dpark01
committed

Commits on Jun 9, 2022

make task lofreq work on empty fasta input
dpark01
committed
name properly
dpark01
committed

Footer

© 2025 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.