Added support for restarting jobs #129
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The changes that take advantage of this will be in a separate qp-klp PR. I wanted to put these changes in mg-scripts, where the parsing code is located near the code that originally generates the file. |
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Added parsing for convert-job job-scripts. From these we are able to reliably retrieve the run-directory and sample-sheet path of an existing but failed job. This will allow us to retrieve the the lane value from the sample-sheet (since it was written to the sheet previously by SPP), giving us the three user-supplied values we'll need to restart a failed SPP job.