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Test of HBVouroboros with pytest

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Bump zipp from 3.5.0 to 3.19.1 in /docs
Test of HBVouroboros with pytest #59: Commit fa28afe pushed by dependabot bot
July 9, 2024 19:36 7m 25s dependabot/pip/docs/zipp-3.19.1
July 9, 2024 19:36 7m 25s
Bump certifi from 2023.7.22 to 2024.7.4 in /docs
Test of HBVouroboros with pytest #58: Commit ce8f497 pushed by dependabot bot
July 6, 2024 00:33 7m 38s dependabot/pip/docs/certifi-2024.7.4
July 6, 2024 00:33 7m 38s
only report RT coordinates and ref and alt
Test of HBVouroboros with pytest #57: Commit a407c5e pushed by Accio
June 19, 2024 14:11 8m 15s master
June 19, 2024 14:11 8m 15s
Bump urllib3 from 1.26.18 to 1.26.19 in /docs
Test of HBVouroboros with pytest #56: Commit c6d6507 pushed by dependabot bot
June 18, 2024 01:38 7m 23s dependabot/pip/docs/urllib3-1.26.19
June 18, 2024 01:38 7m 23s
add type and a new reference
Test of HBVouroboros with pytest #55: Commit 048d555 pushed by Accio
June 17, 2024 13:43 7m 39s master
June 17, 2024 13:43 7m 39s
mutations that cause HBV to develop resistance against nucleoside ana…
Test of HBVouroboros with pytest #54: Commit 9654f9b pushed by Accio
June 17, 2024 13:21 8m 8s mutation
June 17, 2024 13:21 8m 8s
mutations that cause HBV to develop resistance against nucleoside ana…
Test of HBVouroboros with pytest #53: Commit 9654f9b pushed by Accio
June 17, 2024 13:20 7m 52s master
June 17, 2024 13:20 7m 52s
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Test of HBVouroboros with pytest #52: Commit e3cf558 pushed by dependabot bot
May 21, 2024 05:55 23m 49s dependabot/pip/docs/requests-2.32.0
May 21, 2024 05:55 23m 49s
Bump jinja2 from 3.0.1 to 3.1.4 in /docs
Test of HBVouroboros with pytest #51: Commit 038fd36 pushed by dependabot bot
May 6, 2024 17:42 11m 13s dependabot/pip/docs/jinja2-3.1.4
May 6, 2024 17:42 11m 13s
Bump gitpython from 3.1.30 to 3.1.41 in /docs
Test of HBVouroboros with pytest #50: Commit 69d6f75 pushed by dependabot bot
April 12, 2024 12:43 8m 28s dependabot/pip/docs/gitpython-3.1.41
April 12, 2024 12:43 8m 28s
Merge pull request #54 from bedapub/dependabot/pip/docs/idna-3.7
Test of HBVouroboros with pytest #49: Commit a90cb97 pushed by Accio
April 12, 2024 12:42 8m 19s master
April 12, 2024 12:42 8m 19s
Bump idna from 2.10 to 3.7 in /docs
Test of HBVouroboros with pytest #48: Commit 13ca9c9 pushed by dependabot bot
April 11, 2024 22:20 8m 13s dependabot/pip/docs/idna-3.7
April 11, 2024 22:20 8m 13s
updated fasta.nin
Test of HBVouroboros with pytest #47: Commit 70938ee pushed by Accio
March 21, 2024 10:12 37m 24s PS3909
March 21, 2024 10:12 37m 24s
add download genomes
Test of HBVouroboros with pytest #46: Commit 90b7f0e pushed by Accio
March 20, 2024 15:22 35m 48s PS3909
March 20, 2024 15:22 35m 48s
using inputRef explicitly instead of inpt
Test of HBVouroboros with pytest #45: Commit fb43245 pushed by Accio
March 20, 2024 15:08 38m 4s PS3909
March 20, 2024 15:08 38m 4s
fix the bug that when only one sample is provided, the coverage plot …
Test of HBVouroboros with pytest #44: Commit ea080f5 pushed by Accio
March 20, 2024 12:48 37m 29s master
March 20, 2024 12:48 37m 29s
Test of HBVouroboros with pytest
Test of HBVouroboros with pytest #43: by Accio
March 18, 2024 17:04 22m 29s master
March 18, 2024 17:04 22m 29s
fixed conflict
Test of HBVouroboros with pytest #42: Commit 16aa2d9 pushed by Accio
March 18, 2024 16:39 24m 24s master
March 18, 2024 16:39 24m 24s
run on 18.03
Test of HBVouroboros with pytest #41: Commit c6d1837 pushed by Accio
March 18, 2024 16:33 22m 18s master
March 18, 2024 16:33 22m 18s
Bump gitpython from 3.1.30 to 3.1.41 in /docs
Test of HBVouroboros with pytest #40: Commit 1bd7afb pushed by dependabot bot
March 14, 2024 12:19 19m 52s dependabot/pip/docs/gitpython-3.1.41
March 14, 2024 12:19 19m 52s
Bump jinja2 from 3.0.1 to 3.1.3 in /docs
Test of HBVouroboros with pytest #39: Commit 2cf4fda pushed by dependabot bot
March 14, 2024 12:19 20m 3s dependabot/pip/docs/jinja2-3.1.3
March 14, 2024 12:19 20m 3s
Merge pull request #50 from bedapub/dependabot/pip/docs/gitpython-3.1.37
Test of HBVouroboros with pytest #38: Commit 84b4712 pushed by Accio
March 14, 2024 12:19 19m 13s master
March 14, 2024 12:19 19m 13s
Merge pull request #51 from bedapub/dependabot/pip/docs/urllib3-1.26.18
Test of HBVouroboros with pytest #37: Commit 16e1b39 pushed by Accio
March 14, 2024 12:19 19m 20s master
March 14, 2024 12:19 19m 20s
add function that checks sample names, because we assume that sample …
Test of HBVouroboros with pytest #36: Commit 9d9110c pushed by Accio
March 14, 2024 10:57 19m 36s PS3909
March 14, 2024 10:57 19m 36s
add function that checks sample names, because we assume that sample …
Test of HBVouroboros with pytest #35: Commit 9d9110c pushed by Accio
March 14, 2024 10:54 18m 54s master
March 14, 2024 10:54 18m 54s