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Releases: X3N1A/ENT3C

v.1.0.2

27 Aug 09:44
dc6e344
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Modifications from v1.0.1:

  • MATLAB implementation now as function with input <config.file.json>
  • normalization dataset is now a parameter in config file: "WEIGHTS_NAME"
  • fixed bug when dealing with very sparse sub-matrices. Such a matrix can result in nan values in S; these are ignored when computing similarity

v.1.0.1

05 Aug 09:26
147dfbc
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Modifications from v1.0.0:

  • Update README for setting parameters and command-line usage
  • chromosome list in configuration file must be a comma-separated-list
  • ENT3C.jl is now called with options --config-file=</path/to/config.json> and --install-deps <yes/no>
    • 2nd argument: optional julia dependency management with Project.toml and Manifest.toml files
  • new requirement for julia implementation is ubuntu's hdf5tools for proper reading of cooler containers

ENT3Cv1.0.0

05 Jun 13:47
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