Releases: X3N1A/ENT3C
Releases · X3N1A/ENT3C
v.1.0.2
Modifications from v1.0.1:
- MATLAB implementation now as function with input
<config.file.json>
- normalization dataset is now a parameter in config file:
"WEIGHTS_NAME"
- fixed bug when dealing with very sparse sub-matrices. Such a matrix can result in
nan
values inS
; these are ignored when computing similarity
v.1.0.1
Modifications from v1.0.0:
- Update README for setting parameters and command-line usage
- chromosome list in configuration file must be a comma-separated-list
ENT3C.jl
is now called with options--config-file=</path/to/config.json>
and--install-deps <yes/no>
- 2nd argument: optional julia dependency management with
Project.toml
andManifest.toml
files
- 2nd argument: optional julia dependency management with
- new requirement for julia implementation is ubuntu's hdf5tools for proper reading of cooler containers