Catch further cluster merging issue

Merge pull request #3 from sdentro/dev

Merging v2.1.3

Catch single superclone case

Merge pull request #2 from sdentro/dev

Dev

Consider only SNVs on autosomes

Merge pull request #1 from sdentro/dev

Dev

Upgrade to DPClust v2.2.5

Also producing probabilistic co-assignment matrix.

Upgrade to R package

Upgrade to DPClust v2.2.2

Sorting SNVs by chromosome in output

v1.0.5

Updating packages and fix sorting issue

DPClust Docker

Small fix to catch no CNA cases when estimating cellularity

DPClust Docker - No cellularity estimate

Turned off the cellularity estimation. The answer to subchallenge1A is always NA.

DPClust Docker bugfixes

Output is now in CP space instead of CCF.
Also added a cleanup step where small clusters are removed.