leiden 0.4.3.1

Bug fix to avoid archive when dependencies are updated.

• corrects mismatched chunk delimiters in documentation

Resolves:
yihui/knitr#2057
yihui/knitr#2306

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What's Changed

• Remove the extra ` by @yihui in #16

New Contributors

• @yihui made their first contribution in #16

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Full Changelog: 0.4.2...0.4.3.1

leiden 0.4.3

• removed deprecated method to create sparse matrices

• correct links in citations and vignettes

Full Changelog: 0.4.2...0.4.3

leiden 0.4.2

• migrates bug fixes to conda environment and limit on total cells to refactored package

• allows calling igraph::community_leiden for supported parameters (requires igraph v1.2.7 or later)

• automatically calls native R version of leiden rather than Python to improve performance

• updates vignettes and unit tests to ensure consistent results with past versions

• migrates changes to retain on CRAN to leiden 0.4.0 (alpha) with igraph::community_leiden call

• updates the benchmarking vignette to compare performance to legacy versions using reticulate

Full Changelog: 0.3.10...0.4.2

leiden 0.3.10

• removes limitation on number of cells (disables scientific notation within function call): resolves #12

• resolves conflict between base and r-reticulate conda environments on loading: resolves #20

• updates conda environment in interactive sessions only for compliance to CRAN checks

• resolves formatting error in Rmarkdown vignettes (yihui/knitr#2057)

• update testing for bipartite graphs for compatibility with newer version

What's Changed

• Remove the extra ` by @yihui in #16

New Contributors

• @yihui made their first contribution in #16

Full Changelog: 0.3.9...0.3.10

leiden 0.3.8

• bug fixes for vignettes to retain on CRAN

leiden 0.4.1 alpha release

migrates changes to retain on CRAN to leiden 0.4.0 (alpha)

leiden 0.3.7

• remove cairo graphics from vignette to retain on CRAN

leiden 0.4.0 alpha release

adds calling community_leiden in igraph (requires development version of igraph 0.2.7 or later)

leiden 0.3.6

• add methods for multiplex community detection from a list of graphs (requires leidenalg 0.7.1)

• add support for maximum community size (depends on leidenalg 0.8.2), if available

leiden 0.3.5

• background changes to build vignettes on CRAN