fix: add renku cli to PATH in rstudio

[olevski]

Fixes renku not being present in the PATH of rstudio images.

[olevski]

This project: https://renkulab.io/projects/tasko.olevski/test-r-project-1 uses the image built in this repo. And renku cli works in both rstudio and jupyterlab.

[rokroskar]

if I'm reading the R Dockerfile correctly, we never actually install renku in there. Should we copy it from the python base image like we do the other python packages here? I guess all that is needed is something like

COPY --from renku_base /home/jovyan/.renku /home/rstudio/.renku

[olevski]

if I'm reading the R Dockerfile correctly, we never actually install renku in there. Should we copy it from the python base image like we do the other python packages here? I guess all that is needed is something like

COPY --from renku_base /home/jovyan/.renku /home/rstudio/.renku

@rokroskar what you describe does happen in the Dockerfile in lines 78 and 79. The link to them did not work. Renku is installed in the home directory and we copy the whole home directory over.

Maybe I misunderstand what you mean though.

[gavin-k-lee]

I verified that the cli is available in that image 👍

[rokroskar]

@olevski you're totally right I missed it because of the line break 🤦 !!

[olevski]

@rokroskar @gavin-k-lee if you are done testing/reviewing can you approve please?