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Add comp#57

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enryH merged 13 commits intodevRasmussenLab/pimms:devfrom add_compRasmussenLab/pimms:add_compCopy head branch name to clipboardMar 5, 2024

+1,243-832

Commits

Commits on Feb 19, 2024

• 🎨➕ use njab, depreceate AnalyzePeptides for data loading

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• 🎨 remove RT_min parameter (replace by sample_completeness)

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Commits on Feb 20, 2024

• 🎨🔥 clean up collaberative filtering code

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• 🎨 DAE: simplify ModelAdapter

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• 🔥 remove cmd code

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• 🎨 Combine VAE ModelAdapter CallBack

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Commits on Feb 21, 2024

• ✨ Experiment with only sampling parts of the data

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Commits on Feb 23, 2024

• ✨ make DAE and VAE train without a validation dataset

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Commits on Feb 24, 2024

• 🐛 make CF Sklearn model run without MPS

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• 🎨 small improvements in tutorial and explicit import for CF Transformer

  

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Commits on Mar 5, 2024

• ✨ rev. 3 tables

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• ✨ Add option to dump agg. pred across models

  

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• 📝 improve installation instructions

  

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