Update cmake build with GTG code #272
Comments
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@YaliMao-NOAA Please see the compiling errors from gtg code above. |
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Kate, |
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The lowercase |
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@YaliMao-NOAA Could you try Kyle's suggestion for changing gtg code from |
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@YaliMao-NOAA You may find the instruction of build UPP via camke at |
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@kgerheiser I was able to duplicate the error messages as Kate did, so I took your suggestion. After changing the file extensions from f90 to F90 and modifying sorc/ncep_post.fd/CMakeLists.txt, I ran into another error message: GDSWZD_MOD comes from module ip: Looking into tests/build/sorc/ncep_post.fd/CMakeFiles/upp.dir/flags.make, I didn't see ip/3.3.3/include_4 included in Fortran_INCLUDES. Is this the reason why I got the error message as above? |
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Is there a missing |
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@kgerheiser Are you talking about cmake/PackageConfig.cmake.in? There is a line: |
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@kgerheiser May you please take a look when you get a chance? The package is on Venus at /gpfs/dell2/emc/modeling/noscrub/Yali.Mao/git/EMC_post_wafs. ip/v3.3.3 is loaded successfully, somehow IP_INC4 is not included in Fortran_INCLUDES for compiling. Thank you! |
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Is there a branch or somewhere I can get the code from and build myself? |
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@kgerheiser I followed Wen's instruction earlier, https://github.com/NOAA-EMC/EMC_post/wiki/Building-UPP#build-standalone-upp-via-cmake. |
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@kgerheiser Hi Kyle, not sure whether you caught the message earlier. I have a copy of UPP GTG code on Venus at /gpfs/dell2/emc/modeling/noscrub/Yali.Mao/git/EMC_post_wafs. There are two differences from the general UPP that you can clone from github.
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You need an The library no longer links to ip because of the OpenMP dependency, but now it needs to compile with it. |
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@kgerheiser Great! It works now. Thank you for your help. |
With adding the change you suggest, I tested upp lib building with stub gtg code and didn't see -qopenmp in the compiling log. I would assume this change would not have impact on the upp lib building with openmp disabled, right? |
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I expected OpenMP to propagate to UPP if you link to |
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@kgerheiser Both Wen and I ran into runtime error on Hera, while Wen got runtime error on Dell but I didn't. So I debugged on Hera, found a temporary fix but I really doubt the runtime error coming from cmake compiling, which doesn't handle optional arguments well. Error messages as shown in /scratch2/NCEPDEV/stmp3/Yali.Mao/run_gfs_post.oe18041469
I have a jobcard and you can just modify it for your test run:
Please re-run the jobcard again.
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1. Fix buzillar #1207 http://www2.spa.ncep.noaa.gov/bugzilla/show_bug.cgi?id=1207 2. EMC_post issue NOAA-EMC#272
* To make 'cmake' go through for GTG, 1. GTG source code file extensions are changed from f90 to F90 2. Add ip::ip_4 back to sorc/ncep_post.fd/CMakeLists.txt * Made a new tag of NCAR GTG to change file extension from f90 to F90, then updated Externals.cfg with this new tag * Update GTG tag to fix two issues: 1. Fix buzillar #1207 http://www2.spa.ncep.noaa.gov/bugzilla/show_bug.cgi?id=1207 2. EMC_post issue #272
* To make 'cmake' go through for GTG, 1. GTG source code file extensions are changed from f90 to F90 2. Add ip::ip_4 back to sorc/ncep_post.fd/CMakeLists.txt * Made a new tag of NCAR GTG to change file extension from f90 to F90, then updated Externals.cfg with this new tag * Update GTG tag to fix two issues: 1. Fix buzillar #1207 http://www2.spa.ncep.noaa.gov/bugzilla/show_bug.cgi?id=1207 2. EMC_post issue #272 * Pick up GTG new tag fixing the failure because of strong wind * Add debug mode option to tests/compile_upp.sh --------- Co-authored-by: wx20yam <[email protected]> Co-authored-by: yali mao <[email protected]>
The current EMC_post develop branch does not build with GTG code.
Tried to build develop (33eb60e) on WCOSS-Dell with GTG code copied in; build failed:
/gpfs/dell2/emc/modeling/save/Kate.Friedman/git/global-workflow/feature-hpc-stack/sorc/logs/build_ncep_post_33eb60e.log
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