merge in master, and grass and uptake parameter changes #5
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Solver improvements
user controlled history density
This reduces code duplication somewhat by updating a local value of the daylength factor based on the switch value. I also changed the switch to be zero for off and one for on to utilize the existing itrue/ifalse constants.
for daylength switch
User control of fates history diagnostics by dimension, via namelist setting: fates_history_dimlevel. Control is split between high frequency and dynamics frequency variables, where 0 turns off diagnostics, 1 is for site level and 2 is for high-dimensional variables. Used to speed up the model when no higher dimension varaibles are desired
…istvar Add a recruitment carbon flux history variable
…-updates Update default allometry parameters for tree PFTs
…AI tohave matching with FATES_LAI_AP
…tart-fix-clean prevent FATES-Hydro from failing upon restart with a drought deciduous PFT
Make sure to define `state_vector` if not in land use mode
Bug fix for non-land use run modes
initialize the transitions matrix to zero
…ed crown damage code from grass sapwood allometry
remove damage and parameter changes, merge in main
Implement grass allometric equations and update default allometric parameters for grass PFT
Dynamic Patch Arrays - larger nclmax and nlevleaf
Merged
4 tasks
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