fix(tests): add data files

Adds tests/data to the git tree, allowing CI/CD tests to use them.
IMS-Bio2Core-Facility · Jun 11, 2021 · 3d611d1 · 3d611d1
1 parent 27d420c
commit 3d611d1
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Showing 3 changed files with 16 additions and 0 deletions.
diff --git a/tests/data/biomart_message.csv b/tests/data/biomart_message.csv
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+geneSymbol,gencodeId,transcriptId,refseq
+DLX1,ENSG00000144355,ENST00000341900,NM_001038493
+DLX1,ENSG00000144355,ENST00000361725,NM_178120
+DLX1,ENSG00000144355,ENST00000409492,
+DLX1,ENSG00000144355,ENST00000475989,
+DLX1,ENSG00000144355,ENST00000550686,
+DLX1,ENSG00000144355,ENST00000361609,
diff --git a/tests/data/gtex_message.csv b/tests/data/gtex_message.csv
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+gencodeId,geneSymbol,tissueSiteDetailId,transcriptId,median,unit,datasetId
+ENSG00000144355,DLX1,Brain_Hypothalamus,ENST00000341900,5.184999942779541,read count,gtex_v8
+ENSG00000144355,DLX1,Brain_Hypothalamus,ENST00000361725,3.1599998474121094,read count,gtex_v8
+ENSG00000144355,DLX1,Brain_Hypothalamus,ENST00000409492,1.2300000190734863,read count,gtex_v8
+ENSG00000144355,DLX1,Brain_Hypothalamus,ENST00000475989,1.225000023841858,read count,gtex_v8
+ENSG00000144355,DLX1,Brain_Hypothalamus,ENST00000550686,0.4699999988079071,read count,gtex_v8
+ENSG00000144355,DLX1,Brain_Hypothalamus,ENST00000361609,0.2399999946355819,read count,gtex_v8
diff --git a/tests/data/mane_minimal.csv b/tests/data/mane_minimal.csv
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+,#NCBI_GeneID,gencodeId,HGNC_ID,geneSymbol,name,refseq,RefSeq_prot,transcriptId,Ensembl_prot,MANE_status,GRCh38_chr,chr_start,chr_end,chr_strand
+1181,GeneID:1745,ENSG00000144355,HGNC:2914,DLX1,distal-less homeobox 1,NM_178120,NP_835221.2,ENST00000361725,ENSP00000354478.4,MANE Select,2,172085507,172089674,+
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		,#NCBI_GeneID,gencodeId,HGNC_ID,geneSymbol,name,refseq,RefSeq_prot,transcriptId,Ensembl_prot,MANE_status,GRCh38_chr,chr_start,chr_end,chr_strand
		1181,GeneID:1745,ENSG00000144355,HGNC:2914,DLX1,distal-less homeobox 1,NM_178120,NP_835221.2,ENST00000361725,ENSP00000354478.4,MANE Select,2,172085507,172089674,+