added new tasks to the CLI

[Lucrezia-Cester]

Two tasks were added by Yassine:

1. ACR_spatial_res and 2)acr_slice_thickness.

They both run correctly, however they didn't show up in the CLI so when someone types hazen --help they are not included in what the docstring prints out.

I have now added these.

@heyhaleema, could you please check this out?

[github-actions]

Coverage Report

File	Stmts	Miss	Cover	Missing
hazenlib
HazenTask.py	26	3	88%	32–34
__init__.py	151	41	73%	141, 145, 155, 160, 197, 204–209, 220, 223–230, 250–252, 270–272, 291–293, 302, 307, 313, 363, 374, 380–386, 400–401, 405
exceptions.py	21	4	81%	17–21
relaxometry.py	317	90	72%	238–256, 631, 690–692, 746, 794–816, 834–849, 1174–1177, 1186–1189, 1201–1214, 1217–1222, 1233–1263
shapes.py	20	9	55%	13, 16, 24–29, 32
tools.py	84	8	90%	43–50, 92, 101, 117
hazenlib/tasks
acr_geometric_accuracy.py	145	55	62%	38–72, 176–192, 206–230
acr_ghosting.py	116	42	64%	33–53, 91–93, 123–125, 161–194
acr_slice_position.py	154	53	66%	53–74, 152, 213–258
acr_slice_thickness.py	153	63	59%	40–60, 186–241
acr_snr.py	137	58	58%	34–71, 96, 165–175, 208–221, 254–267
acr_spatial_resolution.py	242	72	70%	66–86, 165, 208, 221–230, 319–374
acr_uniformity.py	89	32	64%	34–54, 121–138
ghosting.py	150	51	66%	18–32, 47, 109–110, 114, 124–125, 151–153, 170–172, 218–256
relaxometry.py	7	2	71%	10–11
slice_position.py	118	22	81%	31, 40–41, 103–104, 130, 210, 217–234
slice_width.py	359	52	86%	34–37, 107, 166–186, 451, 456–457, 463, 468, 530–531, 780–821
snr.py	163	66	60%	62–67, 161–179, 194–203, 221–231, 258–268, 273–283, 314–327, 332–340, 369–382
snr_map.py	106	1	99%	294
spatial_resolution.py	247	44	82%	36–39, 62, 147, 206, 332–368
uniformity.py	78	19	76%	42–45, 91–92, 99, 133–147
TOTAL	2899	787	73%

Tests	Skipped	Failures	Errors	Time
219	0 💤	0 ❌	0 🔥	3m 4s ⏱️

[YassineAzma]

Thanks for this. Just to add that acr_snr, acr_slice_position and acr_geometric_accuracy are also missing.

[Lucrezia-Cester]

@YassineAzma added them.

GitHub copilot complained they weren't there but for some reason I had decided they shouldn't be added in this PR specifically.