LIT beta

V0.5.0 Beta Release

What's New

• Initial public beta release of the Lesion Inpainting Tool (LIT)
• Robust lesion inpainting for T1w MRI scans using diffusion models
• Support for arbitrary lesion shapes and sizes
• Integration with FastSurfer pipeline
• Docker and Singularity containerization

Key Features

• Standalone lesion inpainting functionality
• Optional dilation of lesion masks for better coverage
• Preservation of non-lesion areas in output
• Post-processing tools for masking FastSurfer segmentations and surfaces
• Easy-to-use command line interface

Installation & Usage

See the README.md for detailed installation and usage instructions.

Known Limitations

• FastSurfer integration is still in development - requires manual running of FastSurfer after inpainting

Feedback

Please report any issues or suggestions on our GitHub repository.